RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 LIFRP42702 1097 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 ASPAP45381 313 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 HSD17B4P51659 736 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 BEX3Q00994 111 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 MAP7Q14244 749 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 CPSF6Q16630 551 aaKnown RBP eCLIP8.63□□□□□ -1.03
SFR1-201ENST00000369727 SLC35G1Q2M3R5 365 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 SKAP1Q86WV1 359 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 ZNF654Q8IZM8 581 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 CTCFLQ8NI51 663 aaPredicted RBP8.63□□□□□ -1.03
SFR1-201ENST00000369727 SCFD2Q8WU76 684 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 TBC1D5Q92609 795 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 GATA6Q92908 595 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 TRIM43Q96BQ3 446 aaPredicted RBP8.63□□□□□ -1.03
SFR1-201ENST00000369727 TAAR1Q96RJ0 339 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 ACSS3Q9H6R3 686 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 PCDHA1Q9Y5I3 950 aa8.63□□□□□ -1.03
SFR1-201ENST00000369727 CCDC69A6NI79 296 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 SH2B2O14492 632 aaPredicted RBP8.62□□□□□ -1.03
SFR1-201ENST00000369727 TLR3O15455 904 aaKnown RBP8.62□□□□□ -1.03
SFR1-201ENST00000369727 CYTH3O43739 400 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 PPP1R11O60927 126 aaPredicted RBP8.62□□□□□ -1.03
SFR1-201ENST00000369727 CFBP00751 764 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 GNAQP50148 359 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 CPT1AP50416 773 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 TTLL4Q14679 1199 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 PPP2R5BQ15173 497 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 STXBP2Q15833 593 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 MSMPQ1L6U9 139 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 BRDTQ58F21 947 aaPredicted RBP8.62□□□□□ -1.03
SFR1-201ENST00000369727 CXCL17Q6UXB2 119 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 HOMER1Q86YM7 354 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 SLC43A3Q8NBI5 491 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 BADQ92934 168 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 PIGSQ96S52 555 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 RMDN3Q96TC7 470 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 LZTS2Q9BRK4 669 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 SPZ1Q9BXG8 430 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 GSX1Q9H4S2 264 aaPredicted RBP8.62□□□□□ -1.03
SFR1-201ENST00000369727 TMEM39AQ9NV64 488 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 COL20A1Q9P218 1284 aa8.62□□□□□ -1.03
SFR1-201ENST00000369727 SCN10AQ9Y5Y9 1956 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 CYP26A1O43174 497 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 KPNA6O60684 536 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 EIF3JO75822 258 aaKnown RBP8.61□□□□□ -1.03
SFR1-201ENST00000369727 TXNP10599 105 aaKnown RBP8.61□□□□□ -1.03
SFR1-201ENST00000369727 RAG1P15918 1043 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 LIG1P18858 919 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 ITGA7Q13683 1181 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 KRT32Q14532 448 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 TMEM63BQ5T3F8 832 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 ARHGEF16Q5VV41 709 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 NFXL1Q6ZNB6 911 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 FAM126BQ8IXS8 530 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 OR6J1Q8NGC5 347 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 PXMP2Q9NR77 195 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 DCTN4Q9UJW0 460 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 TBX21Q9UL17 535 aa8.61□□□□□ -1.03
SFR1-201ENST00000369727 MYH7BA7E2Y1 1941 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 GCOM1H8Y6P7 765 aaPredicted RBP8.6□□□□□ -1.03
SFR1-201ENST00000369727 TIMP1P01033 207 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 CD4P01730 458 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 POLR2MP0CAP2 368 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 PTGS1P23219 599 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 CCDC62Q6P9F0 684 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 SGMS1Q86VZ5 419 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 RRP36Q96EU6 259 aaKnown RBP8.6□□□□□ -1.03
SFR1-201ENST00000369727 WDR89Q96FK6 387 aaPredicted RBP8.6□□□□□ -1.03
SFR1-201ENST00000369727 NEK1Q96PY6 1258 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 PDCD2LQ9BRP1 358 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 MYL10Q9BUA6 226 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 CCDC86Q9H6F5 360 aaKnown RBP8.6□□□□□ -1.03
SFR1-201ENST00000369727 SLC12A7Q9Y666 1083 aa8.6□□□□□ -1.03
SFR1-201ENST00000369727 GRIN2DO15399 1336 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 ARIH2O95376 493 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 BRD1O95696 1058 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 GH1P01241 217 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 HMGB1P09429 215 aaKnown RBP8.59□□□□□ -1.03
SFR1-201ENST00000369727 ITGB8P26012 769 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 PURAQ00577 322 aaKnown RBP8.59□□□□□ -1.03
SFR1-201ENST00000369727 EXOSC10Q01780 885 aaKnown RBP8.59□□□□□ -1.03
SFR1-201ENST00000369727 FPGSQ05932 587 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 SHHQ15465 462 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 ERICH6BQ5W0A0 696 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 MFSD5Q6N075 450 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 KCNV1Q6PIU1 500 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 SEPT14Q6ZU15 432 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 VSIG10LQ86VR7 867 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 FANCBQ8NB91 859 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 KCNB2Q92953 911 aa8.59□□□□□ -1.03
SFR1-201ENST00000369727 MTG1Q9BT17 334 aaPredicted RBP8.59□□□□□ -1.03
SFR1-201ENST00000369727 SEC63Q9UGP8 760 aaKnown RBP8.59□□□□□ -1.03
SFR1-201ENST00000369727 FRMPD4Q14CM0 1322 aa8.58□□□□□ -1.04
SFR1-201ENST00000369727 TMPRSS2O15393 492 aa8.58□□□□□ -1.04
SFR1-201ENST00000369727 EPB41L2O43491 1005 aaKnown RBP8.58□□□□□ -1.04
SFR1-201ENST00000369727 REC8O95072 547 aa8.58□□□□□ -1.04
SFR1-201ENST00000369727 PLEKHA8P1O95397 391 aa8.58□□□□□ -1.04
SFR1-201ENST00000369727 MYL3P08590 195 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms