RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 DPP7Q9UHL4 492 aa3.59□□□□□ -1.83
RNU6-428P-201ENST00000362942 SAP30BPQ9UHR5 308 aaKnown RBP3.59□□□□□ -1.83
RNU6-428P-201ENST00000362942 EVLQ9UI08 416 aaPredicted RBP3.59□□□□□ -1.83
RNU6-428P-201ENST00000362942 ZFR2Q9UPR6 939 aaKnown RBP3.59□□□□□ -1.83
RNU6-428P-201ENST00000362942 TCAF1Q9Y4C2 921 aa3.59□□□□□ -1.83
RNU6-428P-201ENST00000362942 GPR45Q9Y5Y3 372 aa3.59□□□□□ -1.83
RNU6-428P-201ENST00000362942 A0A1W2PR48 441 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 KLHL33A6NCF5 533 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 CYP27B1O15528 508 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 FOXD2O60548 495 aaPredicted RBP3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 KATNA1O75449 491 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 RAD17O75943 681 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 ALDH1A2O94788 518 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 GASTP01350 101 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 VCAM1P19320 739 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 EVA1CP58658 441 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 HGFACQ04756 655 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 RIN1Q13671 783 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 GRM7Q14831 915 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 TBR1Q16650 682 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 MFSD5Q6N075 450 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 ADGRE4PQ86SQ3 457 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 ZBTB46Q86UZ6 589 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 SLC41A1Q8IVJ1 513 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 C1orf162Q8NEQ5 155 aaPredicted RBP3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 SNX33Q8WV41 574 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 FAM89AQ96GI7 184 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 FAXDC2Q96IV6 333 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 RPL10LQ96L21 214 aaKnown RBP3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 OR14A2Q96R54 314 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 CDK5RAP1Q96SZ6 601 aaKnown RBP3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 DPYSL5Q9BPU6 564 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 MEGF9Q9H1U4 602 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 DEF6Q9H4E7 631 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 GREM2Q9H772 168 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 NCDNQ9UBB6 729 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 CLCA2Q9UQC9 943 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 SLC30A1Q9Y6M5 507 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 RPTORQ8N122 1335 aa3.58□□□□□ -1.84
RNU6-428P-201ENST00000362942 FAM171A2A8MVW0 826 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 XPOTO43592 962 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 MFAP3LO75121 409 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 IPO13O94829 963 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 ENDOD1O94919 500 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 SNUPNO95149 360 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 MT-CO1P00395 513 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 RPLP2P05387 115 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 PDGFRBP09619 1106 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 RBP3P10745 1247 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 MTNR1BP49286 362 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 PER3P56645 1201 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 SRSF2Q01130 221 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 MALLQ13021 153 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 ACAP2Q15057 778 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 PTPN21Q16825 1174 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 ABCB5Q2M3G0 1257 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 SPATS1Q496A3 300 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 BRDTQ58F21 947 aaPredicted RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 EFCAB2Q5VUJ9 269 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 FAM111BQ6SJ93 734 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 KCNK18Q7Z418 384 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 LIMS2Q7Z4I7 341 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 LYSMD2Q8IV50 215 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 CMIPQ8IY22 773 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 ANKRD35Q8N283 1001 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 GLB1L3Q8NCI6 653 aaPredicted RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 PIK3C3Q8NEB9 887 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 GPR156Q8NFN8 814 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 OR5M3Q8NGP4 307 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 ZNF480Q8WV37 535 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 CFHR4Q92496 578 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 FUBP3Q96I24 572 aaKnown RBP eCLIP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 C20orf173Q96LM9 149 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 CDC5LQ99459 802 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 FDXACB1Q9BRP7 624 aaPredicted RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 PLA2G12BQ9BX93 195 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 SLC13A1Q9BZW2 595 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 EPC1Q9H2F5 836 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 IL23AQ9NPF7 189 aa3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 RBM12Q9NTZ6 932 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 DDX56Q9NY93 547 aaKnown RBP3.57□□□□□ -1.84
RNU6-428P-201ENST00000362942 E2F8A0AVK6 867 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 PATE3B3GLJ2 98 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 MATN2O00339 956 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 GABRDO14764 452 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 AKR1B10O60218 316 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 ZNF623O75123 536 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 AGXTP21549 392 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 COMTP21964 271 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 CTSSP25774 331 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 ECHS1P30084 290 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 CRHR1P34998 444 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 IARSP41252 1262 aaKnown RBP3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 RECQLP46063 649 aaPredicted RBP3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 SELENOPP49908 381 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 UBE3CQ15386 1083 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 ADRM1Q16186 407 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 INAVAQ3KP66 663 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 TCTN3Q6NUS6 607 aa3.56□□□□□ -1.84
RNU6-428P-201ENST00000362942 FUKQ8N0W3 1084 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms