RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 TEX33O43247 280 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 SORBS3O60504 671 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 PSMA2P25787 234 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 PHKA2P46019 1235 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 ENOSF1Q7L5Y1 443 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 MMP19Q99542 508 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 UPF3AQ9H1J1 476 aaKnown RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 EPC1Q9H2F5 836 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 GEMIN8Q9NWZ8 242 aaKnown RBP13.03□□□□□ -0.32
DNMT1-202ENST00000359526 AKT3Q9Y243 479 aa13.03□□□□□ -0.32
DNMT1-202ENST00000359526 TBX3O15119 743 aa13.02□□□□□ -0.32
DNMT1-202ENST00000359526 KRT80Q6KB66 452 aa13.02□□□□□ -0.32
DNMT1-202ENST00000359526 ELOA2Q8IYF1 753 aaPredicted RBP13.02□□□□□ -0.32
DNMT1-202ENST00000359526 RDM1Q8NG50 284 aa13.02□□□□□ -0.32
DNMT1-202ENST00000359526 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.32
DNMT1-202ENST00000359526 NOC2LQ9Y3T9 749 aaKnown RBP13.02□□□□□ -0.32
DNMT1-202ENST00000359526 ANGPTL3Q9Y5C1 460 aa13.02□□□□□ -0.32
DNMT1-202ENST00000359526 SYNJ2BP-COX16A0A087WUM0 186 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 K7ERI5 159 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 STXBP3O00186 592 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 SNRPFP62306 86 aaKnown RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 CCZ1BP86790 482 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 CCZ1P86791 482 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 PDCD2Q16342 344 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 FRMD5Q7Z6J6 570 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 MAML1Q92585 1016 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 NRBF2Q96F24 287 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 ATP6V0A4Q9HBG4 840 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 KCND2Q9NZV8 630 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 COX16Q9P0S2 106 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 GYG2O15488 501 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 ELF1P32519 619 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 IGBP1P78318 339 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 NFRKBQ6P4R8 1299 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 KLC3Q6P597 504 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 CHMP6Q96FZ7 201 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 LRRC4Q9HBW1 653 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 KLC4Q9NSK0 619 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 NUB1Q9Y5A7 615 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 SLIT3O75094 1523 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 ARL13BQ3SXY8 428 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 MTERF2Q49AM1 385 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 LRIG3Q6UXM1 1119 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 ZC3H18Q86VM9 953 aaKnown RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 CYP26B1Q9NR63 512 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 NXF1Q9UBU9 619 aaKnown RBP13.02□□□□□ -0.33
DNMT1-202ENST00000359526 PPME1Q9Y570 386 aa13.02□□□□□ -0.33
DNMT1-202ENST00000359526 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 GH2P01242 217 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 PPP4CP60510 307 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 BEND6Q5SZJ8 279 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 SPOPLQ6IQ16 392 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 TRIM72Q6ZMU5 477 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.01□□□□□ -0.338e-8■■■■■ 53
DNMT1-202ENST00000359526 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 TOPORSQ9NS56 1045 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 MRPS25P82663 173 aaKnown RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 RFFLQ8WZ73 363 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 ASNSD1Q9NWL6 643 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 SALL1Q9NSC2 1324 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 POTEMA6NI47 508 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 H0Y3Z8 333 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 GNGT2O14610 69 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 APOEP02649 317 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 PYGBP11216 843 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 NCF2P19878 526 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 PDIA5Q14554 519 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 TAF1BQ53T94 588 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 SYDE1Q6ZW31 735 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 METTL16Q86W50 562 aaKnown RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 HEXIM2Q96MH2 286 aaKnown RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 KCNF1Q9H3M0 494 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 APOBEC2Q9Y235 224 aaKnown RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 TAC1P20366 129 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 PEX3P56589 373 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 TMPRSS15P98073 1019 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 SPATA4Q8NEY3 305 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 PIP4K2CQ8TBX8 421 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 ZNF564Q8TBZ8 553 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 GCOM2Q9BZD3 368 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 CCSER1Q9C0I3 900 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
DNMT1-202ENST00000359526 SNX12Q9UMY4 172 aa13.01□□□□□ -0.33
DNMT1-202ENST00000359526 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
DNMT1-202ENST00000359526 KPNA7A9QM74 516 aa13□□□□□ -0.33
DNMT1-202ENST00000359526 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
DNMT1-202ENST00000359526 SIX6OS1Q8N1H7 587 aa13□□□□□ -0.33
DNMT1-202ENST00000359526 SNF8Q96H20 258 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms