RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 GDF3Q9NR23 364 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 MAP3K20Q9NYL2 800 aaKnown RBP14.85□□□□□ -0.03
XRCC6-201ENST00000359308 TBX20Q9UMR3 447 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 COG5Q9UP83 839 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 USP20Q9Y2K6 914 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 PFASO15067 1338 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 ALCAMQ13740 583 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 SNRNP35Q16560 246 aaKnown RBP14.85□□□□□ -0.03
XRCC6-201ENST00000359308 TAF3Q5VWG9 929 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 DCAF15Q66K64 600 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 IFT20Q8IY31 132 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 RFFLQ8WZ73 363 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 CEP170P1Q96L14 293 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 TMEM59LQ9UK28 342 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 STXBP5LQ9Y2K9 1186 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 PCDHA10Q9Y5I2 948 aa14.85□□□□□ -0.03
XRCC6-201ENST00000359308 A0A0A6YYK5 440 aaPredicted RBP14.84□□□□□ -0.03
XRCC6-201ENST00000359308 KCNA2P16389 499 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 CAPN2P17655 700 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 SFNP31947 248 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 HNRNPH2P55795 449 aaKnown RBP14.84□□□□□ -0.03
XRCC6-201ENST00000359308 DMP1Q13316 513 aaPredicted RBP14.84□□□□□ -0.03
XRCC6-201ENST00000359308 MYBPC2Q14324 1141 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 KIF22Q14807 665 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 GLE1Q53GS7 698 aaKnown RBP14.84□□□□□ -0.03
XRCC6-201ENST00000359308 NAA35Q5VZE5 725 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 SWSAP1Q6NVH7 229 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 SEMA4DQ92854 862 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 ARID2Q68CP9 1835 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 POLR2AP24928 1970 aaKnown RBP14.84□□□□□ -0.03
XRCC6-201ENST00000359308 PCNTO95613 3336 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 SLC39A4Q6P5W5 647 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 EMBQ6PCB8 327 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 CCDC60Q8IWA6 550 aaPredicted RBP14.84□□□□□ -0.03
XRCC6-201ENST00000359308 C12orf56Q8IXR9 622 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 RUBCNQ92622 972 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 AGPAT1Q99943 283 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 A1CFQ9NQ94 594 aaKnown RBP14.84□□□□□ -0.03
XRCC6-201ENST00000359308 GGA3Q9NZ52 723 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 INTUQ9ULD6 942 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 NCANO14594 1321 aa14.84□□□□□ -0.03
XRCC6-201ENST00000359308 MYH9P35579 1960 aaKnown RBP14.83□□□□□ -0.03
XRCC6-201ENST00000359308 FZD9O00144 591 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 PGRMC1O00264 195 aaKnown RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 ATMINO43313 823 aaPredicted RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 TMEM253P0C7T8 217 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 CNGA1P29973 690 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 DSG3P32926 999 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 TNNC1P63316 161 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 DDX42Q86XP3 938 aaKnown RBP eCLIP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 PPM1KQ8N3J5 372 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 PBKQ96KB5 322 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 AS3MTQ9HBK9 375 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 KMT5AQ9NQR1 393 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 GINM1Q9NU53 330 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 SEPT9Q9UHD8 586 aaPredicted RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 TNFRSF8P28908 595 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 ERVK-9P63128 1117 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 FSTL1Q12841 308 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 ADAT2Q7Z6V5 191 aaKnown RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 RPUSD2Q8IZ73 545 aaKnown RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 ACTRT1Q8TDG2 376 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 AFAP1L1Q8TED9 768 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 ZNF526Q8TF50 670 aaPredicted RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 HES6Q96HZ4 224 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 KREMEN1Q96MU8 473 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.83□□□□□ -0.042e-7■■□□□ 12
XRCC6-201ENST00000359308 ST6GALNAC4Q9H4F1 302 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 ANKEF1Q9NU02 776 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 PSD3Q9NYI0 1048 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 SUCLA2Q9P2R7 463 aaPredicted RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 LCTP09848 1927 aa14.83□□□□□ -0.04
XRCC6-201ENST00000359308 ZNFX1Q9P2E3 1918 aaKnown RBP14.83□□□□□ -0.04
XRCC6-201ENST00000359308 SGPL1O95470 568 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 CETN1Q12798 172 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 MAP4K3Q8IVH8 894 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 SCFD2Q8WU76 684 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 GPRASP2Q96D09 838 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 JPH1Q9HDC5 661 aaPredicted RBP14.82□□□□□ -0.04
XRCC6-201ENST00000359308 CYP39A1Q9NYL5 469 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 ZNF112Q9UJU3 913 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 NR2E1Q9Y466 385 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 KRIT1O00522 736 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 STBD1O95210 358 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 CALCAP01258 141 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 COPB2P35606 906 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 SMTNP53814 917 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 PRKCEQ02156 737 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 ZNF211Q13398 564 aaPredicted RBP14.82□□□□□ -0.04
XRCC6-201ENST00000359308 PRPF4BQ13523 1007 aaKnown RBP14.82□□□□□ -0.04
XRCC6-201ENST00000359308 SLC47A2Q86VL8 602 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 SYCE1Q8N0S2 351 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 NSUN6Q8TEA1 469 aaKnown RBP14.82□□□□□ -0.04
XRCC6-201ENST00000359308 LMBR1Q8WVP7 490 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 CAVIN3Q969G5 261 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 PCDHB18PQ96TA0 734 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 XPNPEP1Q9NQW7 623 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 AMACRQ9UHK6 382 aa14.82□□□□□ -0.04
XRCC6-201ENST00000359308 AMFRQ9UKV5 643 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms