RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 DPYSL4O14531 572 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 MOCS2O96007 188 aaPredicted RBP17.05■□□□□ 0.32
RXRA-201ENST00000356384 LIFRP42702 1097 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 NFRKBQ6P4R8 1299 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 PADI6Q6TGC4 694 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 SP110Q9HB58 689 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 LRRIQ1Q96JM4 1722 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 UBE3AQ05086 875 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 THEMIS2Q5TEJ8 643 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 NBPF10Q6P3W6 841 aaKnown RBP17.05■□□□□ 0.32
RXRA-201ENST00000356384 TMCO5AQ8N6Q1 288 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 OR6P1Q8NGX9 317 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 ARL8AQ96BM9 186 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 NNMTP40261 264 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 PRELPP51888 382 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 ZNF746Q6NUN9 644 aaPredicted RBP17.05■□□□□ 0.32
RXRA-201ENST00000356384 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.05■□□□□ 0.32
RXRA-201ENST00000356384 ABCC3O15438 1527 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 SEC24DO94855 1032 aaPredicted RBP17.05■□□□□ 0.32
RXRA-201ENST00000356384 KCNH2Q12809 1159 aa17.05■□□□□ 0.32
RXRA-201ENST00000356384 GCOM2Q9BZD3 368 aaPredicted RBP17.05■□□□□ 0.32
RXRA-201ENST00000356384 DDX47Q9H0S4 455 aaKnown RBP17.05■□□□□ 0.32
RXRA-201ENST00000356384 PRPF4O43172 522 aaKnown RBP eCLIP17.04■□□□□ 0.325e-7■■■■□ 23.4
RXRA-201ENST00000356384 RAD23BP54727 409 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 ROR1Q01973 937 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 AP3B2Q13367 1082 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 KIAA1586Q9HCI6 787 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 GH2P01242 217 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 KRT14P02533 472 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 CUL3Q13618 768 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 BEST2Q8NFU1 509 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 B4GALNT2Q8NHY0 566 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 ERVK-7P63135 1459 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 PLA2R1Q13018 1463 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 PHKA2P46019 1235 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 TERF2Q15554 542 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 CC2D1AQ6P1N0 951 aaPredicted RBP17.04■□□□□ 0.32
RXRA-201ENST00000356384 ATXN7L3BQ96GX2 97 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 SPON2Q9BUD6 331 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 SEL1LQ9UBV2 794 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 LCMT1Q9UIC8 334 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 STAP1Q9ULZ2 295 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 NLRP14Q86W24 1093 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 MCPH1Q8NEM0 835 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 ZNF507Q8TCN5 953 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 ARHGEF1Q92888 912 aaKnown RBP17.04■□□□□ 0.32
RXRA-201ENST00000356384 ABHD8Q96I13 439 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 TET3O43151 1660 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 ARHGAP10A1A4S6 786 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 ADORA2BP29275 332 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 PBXIP1Q96AQ6 731 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 AIPL1Q9NZN9 384 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 ZNF229Q9UJW7 825 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 AURKCQ9UQB9 309 aa17.04■□□□□ 0.32
RXRA-201ENST00000356384 DENND3A2RUS2 1198 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 TYK2P29597 1187 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 BFARQ9NZS9 450 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 GNA15P30679 374 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 MARCH10Q8NA82 808 aaPredicted RBP17.03■□□□□ 0.32
RXRA-201ENST00000356384 RAD54LQ92698 747 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 OSBPL9Q96SU4 736 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 PJA2O43164 708 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 ZFXP17010 805 aaPredicted RBP17.03■□□□□ 0.32
RXRA-201ENST00000356384 BCAR1P56945 870 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 STXBP2Q15833 593 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 FAM83BQ5T0W9 1011 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 FOXP4Q8IVH2 680 aaPredicted RBP17.03■□□□□ 0.32
RXRA-201ENST00000356384 IP6K2Q9UHH9 426 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 PCDHGB4Q9UN71 923 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 FAM167AQ96KS9 214 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 PPP1R36Q96LQ0 422 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 PALMDQ9NP74 551 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 SLC9A2Q9UBY0 812 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 ARHGAP26Q9UNA1 814 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 ABCB11O95342 1321 aa17.03■□□□□ 0.32
RXRA-201ENST00000356384 CARSP49589 748 aaKnown RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 COASYQ13057 564 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 EFHC2Q5JST6 749 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 ITPRIPL1Q6GPH6 555 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 TMEM179Q6ZVK1 233 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 STX19Q8N4C7 294 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 RBM46Q8TBY0 533 aaKnown RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 ZNF668Q96K58 619 aaPredicted RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 MXD3Q9BW11 206 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 DHX35Q9H5Z1 703 aaKnown RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
RXRA-201ENST00000356384 FBXL5Q9UKA1 691 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 ZNF711Q9Y462 761 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 ASAP2O43150 1006 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 PRCPP42785 496 aa17.02■□□□□ 0.32
RXRA-201ENST00000356384 DYNC1I2Q13409 638 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms