RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ADAMTS10Q9H324 1103 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 LDAHQ9H6V9 325 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MYOTQ9UBF9 498 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SCAF8Q9UPN6 1271 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SIK3Q9Y2K2 1263 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 X6R8D5 127 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SSU72P8A0A1W2PR75 194 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 RRN3P2A6NIE6 340 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 GNAT3A8MTJ3 354 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 AHSGP02765 367 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MYF5P13349 255 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 GSPT1P15170 499 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 KIR3DL1P43629 444 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SLC6A9P48067 706 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SPIRE1Q08AE8 756 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 NFIAQ12857 509 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MALLQ13021 153 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PLS1Q14651 629 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 POSTNQ15063 836 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 JAKMIP3Q5VZ66 844 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 DUSP27Q5VZP5 1158 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 IQCEQ6IPM2 695 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CCDC70Q6NSX1 233 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 C16orf54Q6UWD8 224 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 Q6ZVL8 140 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PPP1R3BQ86XI6 285 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ZGPATQ8N5A5 531 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ASB12Q8WXK4 309 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 AUTS2Q8WXX7 1259 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 P2RX7Q99572 595 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 AMNQ9BXJ7 453 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ADAM7Q9H2U9 754 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 EPB41L1Q9H4G0 881 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 HDAC9Q9UKV0 1011 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 TTC37Q6PGP7 1564 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FADS2P1A8MWK0 482 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CLASP2O75122 1294 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MPIG6BO95866 241 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 HRGP04196 525 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 NPR1P16066 1061 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 PUM3Q15397 648 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ARHGAP15Q53QZ3 475 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CCDC157Q569K6 752 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CC2D1AQ6P1N0 951 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MMS22LQ6ZRQ5 1243 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 SLCO6A1Q86UG4 719 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MYLK4Q86YV6 388 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 HIPK4Q8NE63 616 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 IL31RAQ8NI17 732 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 SKA1Q96BD8 255 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FAM122AQ96E09 287 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 LIN37Q96GY3 246 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ACAP3Q96P50 834 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FAM83CQ9BQN1 747 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 RC3H2Q9HBD1 1191 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 PALD1Q9ULE6 856 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 SYNPO2Q9UMS6 1093 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 STXBP5LQ9Y2K9 1186 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CFAP43Q8NDM7 1665 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 WDR90Q96KV7 1748 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 UBA6A0AVT1 1052 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 TMEM233B4DJY2 109 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 PRRT4C9JH25 899 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 EIF3FO00303 357 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 NPHS1O60500 1241 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 TLR5O60602 858 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 NDST3O95803 873 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 APPP05067 770 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ITGA8P53708 1063 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ANTXR2P58335 489 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FAPQ12884 760 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 TARDBPQ13148 414 aaKnown RBP eCLIP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 G3BP1Q13283 466 aaKnown RBP eCLIP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 NOMO1Q15155 1222 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 SURF1Q15526 300 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MAPRE1Q15691 268 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 EP400NLQ6ZTU2 488 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CEP128Q6ZU80 1094 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MILR1Q7Z6M3 343 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 DTX1Q86Y01 620 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 TEX19Q8NA77 164 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 PCSK9Q8NBP7 692 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ENOX1Q8TC92 643 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MAML1Q92585 1016 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 PHKBQ93100 1093 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FERMT2Q96AC1 680 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ACSS2Q9NR19 701 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ABCF2Q9UG63 623 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 SCOCQ9UIL1 159 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 JAG2Q9Y219 1238 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 PCDHA1Q9Y5I3 950 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 WDR97A6NE52 1622 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 A0A0A6YYK5 440 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 LGALS16A8MUM7 142 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 H7BY64 318 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 IPO5O00410 1097 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CYP17A1P05093 508 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CEACAM5P06731 702 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FPR1P21462 350 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ADSLP30566 484 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms