RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ANKRD35Q8N283 1001 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 LRRC57Q8N9N7 239 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 TCP11Q8WWU5 503 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 HES6Q96HZ4 224 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 RMDN3Q96TC7 470 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 FAM204AQ9H8W3 233 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 C1orf112Q9NSG2 853 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 NRBP2Q9NSY0 501 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 RNF146Q9NTX7 359 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 ADAM21Q9UKJ8 722 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 TBX20Q9UMR3 447 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 NOC2LQ9Y3T9 749 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 RSPH10B2B2RC85 870 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 VWA5AO00534 786 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 THAP12O43422 761 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 EXTL3O43909 919 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 RSPH10BP0C881 870 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 MYZAPP0CAP1 466 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 MYCLP12524 364 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 ATP5DP30049 168 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 HOXD13P35453 343 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 RARRES1P49788 294 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CXCL9Q07325 125 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 BRDTQ58F21 947 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 XKR3Q5GH77 459 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 B4GALNT4Q76KP1 1039 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 GLIS3Q8NEA6 775 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CCHCR1Q8TD31 782 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 BICD1Q96G01 975 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 KRT12Q99456 494 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 PDCD2LQ9BRP1 358 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 LRRC1Q9BTT6 524 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 FGFBP2Q9BYJ0 223 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CNOT10Q9H9A5 744 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 RAVER2Q9HCJ3 691 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 SLC9A2Q9UBY0 812 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 FEZ2Q9UHY8 353 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 FAN1Q9Y2M0 1017 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 PCDHAC2Q9Y5I4 1007 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 LAMA3Q16787 3333 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 EMSYQ7Z589 1322 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 ZNF185O15231 689 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 PHF2O75151 1096 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 FTCDO95954 541 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 SKOR1P84550 965 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 GCNT1Q02742 428 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 TAP1Q03518 808 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 EN1Q05925 392 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 COG2Q14746 738 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 STXBP2Q15833 593 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 SCFD2Q8WU76 684 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 MFSD14AQ96MC6 490 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 AGBL1Q96MI9 1066 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 INPP4AQ96PE3 977 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 TEX13BQ9BXU2 312 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 MTFR1LQ9H019 292 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 C2orf40Q9H1Z8 148 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 FAM124BQ9H5Z6 455 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 JPH1Q9HDC5 661 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 UBE2TQ9NPD8 197 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 RBM12Q9NTZ6 932 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 SCINQ9Y6U3 715 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CCDC169A6NNP5 214 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 LRRIQ3A6PVS8 624 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 DDX39AO00148 427 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 SHOX2O60902 331 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 ACTN1P12814 892 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 GALCP54803 685 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 JAG1P78504 1218 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 MTMR2Q13614 643 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 ZYXQ15942 572 aaKnown RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 KDM7AQ6ZMT4 941 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CYFIP1Q7L576 1253 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 APBB1IPQ7Z5R6 666 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 NT5DC3Q86UY8 548 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 BBXQ8WY36 941 aaPredicted RBP4.02□□□□□ -1.77
RNF38-203ENST00000353739 FAXDC2Q96IV6 333 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 FIZ1Q96SL8 496 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 IMPG2Q9BZV3 1241 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 TMEM134Q9H6X4 195 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 CTTNBP2NLQ9P2B4 639 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 PRDM4Q9UKN5 801 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 SIP14410 1827 aa4.02□□□□□ -1.77
RNF38-203ENST00000353739 TESPA1A2RU30 521 aaPredicted RBP4.01□□□□□ -1.77
RNF38-203ENST00000353739 ZNF233A6NK53 670 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 H3BQF6 201 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 DHX15O43143 795 aaKnown RBP4.01□□□□□ -1.77
RNF38-203ENST00000353739 NCK2O43639 380 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 ZEB2O60315 1214 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 PPFIA4O75335 1185 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 CAPN15O75808 1086 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 ABL1P00519 1130 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 PIGRP01833 764 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 CYP1A2P05177 515 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 INPP5BP32019 993 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 GGCXP38435 758 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 MATR3P43243 847 aaKnown RBP eCLIP4.01□□□□□ -1.77
RNF38-203ENST00000353739 NAMPTP43490 491 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 LIG4P49917 911 aa4.01□□□□□ -1.77
RNF38-203ENST00000353739 EFNA5P52803 228 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms