RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 CASZ1Q86V15 1759 aa16.27■□□□□ 0.2
PTBP1-201ENST00000349038 ANKRD33BA6NCL7 494 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 TXNDC9O14530 226 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 CYTH3O43739 400 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 CAMTA2O94983 1202 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 GSTT1P30711 240 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 MECOMQ03112 1051 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 INTS5Q6P9B9 1019 aaKnown RBP16.27■□□□□ 0.19
PTBP1-201ENST00000349038 SCG3Q8WXD2 468 aaKnown RBP16.27■□□□□ 0.19
PTBP1-201ENST00000349038 ALG3Q92685 438 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 ELMO3Q96BJ8 720 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 CRAMP1Q96RY5 1269 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 PREBQ9HCU5 417 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 SLC4A7Q9Y6M7 1214 aa16.27■□□□□ 0.19
PTBP1-201ENST00000349038 A0A0G2JND7 137 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 AGTP01019 485 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 TPP2P29144 1249 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 GNAQP50148 359 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 MTMR2Q13614 643 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 DRAXINQ8NBI3 349 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 HIPK4Q8NE63 616 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 FAM81AQ8TBF8 368 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 ATG4AQ8WYN0 398 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 STMN2Q93045 179 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 EDEM3Q9BZQ6 932 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 EPB41L4BQ9H329 900 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 C12orf65Q9H3J6 166 aaKnown RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 SLITRK6Q9H5Y7 841 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 CHCHD3Q9NX63 227 aaKnown RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 TAS2R14Q9NYV8 317 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 TFCP2L1Q9NZI6 479 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 TMEM59LQ9UK28 342 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 RPS6KL1Q9Y6S9 549 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 RPTORQ8N122 1335 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 UNC5CO95185 931 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 DLATP10515 647 aaKnown RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 KRT15P19012 456 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 CAVIN4Q5BKX8 364 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 DSTYKQ6XUX3 929 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 NT5DC3Q86UY8 548 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 CYP4X1Q8N118 509 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 NPHS2Q9NP85 383 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 KCNMB3Q9NPA1 279 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 UBN1Q9NPG3 1134 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 PFASO15067 1338 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 CREB3O43889 395 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 COASYQ13057 564 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 GRB10Q13322 594 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 FAM182AQ5T1J6 154 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 CEP128Q6ZU80 1094 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 UNC13DQ70J99 1090 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 NMD3Q96D46 503 aaKnown RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 DNAJC1Q96KC8 554 aaKnown RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 CDC42EP4Q9H3Q1 356 aaKnown RBP16.26■□□□□ 0.19
PTBP1-201ENST00000349038 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 CHMP2BQ9UQN3 213 aa16.26■□□□□ 0.19
PTBP1-201ENST00000349038 FRMPD2Q68DX3 1309 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-201ENST00000349038 GOLGA8RI6L899 631 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 RIPK2O43353 540 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 MYBP10242 640 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 ATP6V1C1P21283 382 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 TMEM62Q0P6H9 643 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 RBM46Q8TBY0 533 aaKnown RBP16.25■□□□□ 0.19
PTBP1-201ENST00000349038 KLF6Q99612 283 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-201ENST00000349038 THAP2Q9H0W7 228 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 BLOC1S4Q9NUP1 217 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 CYP39A1Q9NYL5 469 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 GCNT4Q9P109 453 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 RASA4BC9J798 803 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 RASA4O43374 803 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 SPOPO43791 374 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 STK10O94804 968 aaKnown RBP16.25■□□□□ 0.19
PTBP1-201ENST00000349038 TSPY3P0CV98 308 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 TSPY8P0CW00 308 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
PTBP1-201ENST00000349038 NEK8Q86SG6 692 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 SLC25A41Q8N5S1 370 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 GBP7Q8N8V2 638 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-201ENST00000349038 NDNQ99608 321 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 GALNT8Q9NY28 637 aa16.25■□□□□ 0.19
PTBP1-201ENST00000349038 C2orf71A6NGG8 1288 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 SRRM3A6NNA2 597 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 KLRF2D3W0D1 207 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 HNRNPRO43390 633 aaKnown RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 SLC37A4O43826 429 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 CASP4P49662 377 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 TMED1Q13445 227 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 UBE2SQ16763 222 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 TMEM266Q2M3C6 531 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 TAF1BQ53T94 588 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 DCAF12L1Q5VU92 463 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms