RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 PDP2Q9P2J9 529 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 GGT7Q9UJ14 662 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CHD4Q14839 1912 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 SIGLEC1Q9BZZ2 1709 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 IGF2BP3O00425 579 aaKnown RBP eCLIP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 STK4Q13043 487 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CCDC125Q86Z20 511 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MMADHCQ9H3L0 296 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PSMC3IPQ9P2W1 217 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PAIP2BQ9ULR5 123 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 LMO7Q8WWI1 1683 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CFAP69A5D8W1 941 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CD19P15391 556 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TTI2Q6NXR4 508 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DNAJC24Q6P3W2 148 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PDXDC2PQ6P474 469 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PODNQ7Z5L7 613 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ZNF354CQ86Y25 554 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 METTL13Q8N6R0 699 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CEP70Q8NHQ1 597 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 SLC26A7Q8TE54 656 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 A1CFQ9NQ94 594 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DDX56Q9NY93 547 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MID2Q9UJV3 735 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CNTNAP5Q8WYK1 1306 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 KDM6AO15550 1401 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 LAMA4Q16363 1823 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 HSPA8P11142 646 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CTCFP49711 727 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 POLGP54098 1239 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ICA1Q05084 483 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ITGB3BPQ13352 177 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ZNF211Q13398 564 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TRIP13Q15645 432 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 BRDTQ58F21 947 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 FOXR1Q6PIV2 292 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RGS9BPQ6ZS82 235 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TRIM50Q86XT4 487 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 KCNV2Q8TDN2 545 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CEP95Q96GE4 821 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TMEM47Q9BQJ4 181 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TSSK1BQ9BXA7 367 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 UPF3AQ9H1J1 476 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 KMT5AQ9NQR1 393 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 FAM53CQ9NYF3 392 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 STRIP2Q9ULQ0 834 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ARHGEF16Q5VV41 709 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 ZBED8Q8IZ13 594 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 CELF4Q9BZC1 486 aaKnown RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 UBE4BO95155 1302 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 CYP2D7A0A087X1C5 515 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 APOEP02649 317 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 KCND2Q9NZV8 630 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TMEM253P0C7T8 217 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TBXAS1P24557 533 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 NAIF1Q69YI7 327 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 POTEAQ6S8J7 498 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 PDZD4Q76G19 769 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 GLYCTKQ8IVS8 523 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 XXYLT1Q8NBI6 393 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 NBPF3Q9H094 633 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 MYH2Q9UKX2 1941 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TFR2Q9UP52 801 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 MTO1Q9Y2Z2 717 aaKnown RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 JCADQ9P266 1359 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 MEIS1O00470 390 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TM9SF1O15321 606 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 GLI1P08151 1106 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TCP10Q12799 353 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 ART3Q13508 389 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 LONP2Q86WA8 852 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 RFX6Q8HWS3 928 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 MLXIPLQ9NP71 852 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 ZNF277Q9NRM2 450 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 IP6K2Q9UHH9 426 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 HARSP12081 509 aaKnown RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 ECE1P42892 770 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 SBK1Q52WX2 424 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TEDDM1Q5T9Z0 273 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 CLEC4GQ6UXB4 293 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 DEPTORQ8TB45 409 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 KANSL2Q9H9L4 492 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 GINM1Q9NU53 330 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 DMGDHQ9UI17 866 aaKnown RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 STRNO43815 780 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 KRT19P08727 400 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 MYCLP12524 364 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-203ENST00000343508 LAMB3Q13751 1172 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 C16orf87Q6PH81 154 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TMC4Q7Z404 712 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 TMC3Q7Z5M5 1100 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 EXOC8Q8IYI6 725 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 PCIF1Q9H4Z3 704 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 KIF9Q9HAQ2 790 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 AIPL1Q9NZN9 384 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 MYH3P11055 1940 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 CALB1P05937 261 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 USP17L8P0C7I0 530 aa5.09□□□□□ -1.59
CSMD3-203ENST00000343508 PRPSAP1Q14558 356 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms