RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 BAATQ14032 418 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-202ENST00000342494 C12orf60Q5U649 245 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 COPEO14579 308 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 PALMO75781 387 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 PRCPP42785 496 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 CCT5P48643 541 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 SCARF1Q14162 830 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 TKFCQ3LXA3 575 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 CCDC138Q96M89 665 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 DRC3Q9H069 523 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 DHX35Q9H5Z1 703 aaKnown RBP15.97■□□□□ 0.15
UBE3B-202ENST00000342494 TRPC7Q9HCX4 862 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 NOVA2Q9UNW9 492 aaKnown RBP15.97■□□□□ 0.15
UBE3B-202ENST00000342494 LRRC53A6NM62 1247 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 SLC7A5Q01650 507 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 AP1B1Q10567 949 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 ZNF235Q14590 738 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 IMPG1Q17R60 797 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 TTC8Q8TAM2 541 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 ZNF564Q8TBZ8 553 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-202ENST00000342494 RMDN2Q96LZ7 410 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 ZNF212Q9UDV6 495 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 IP6K2Q9UHH9 426 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 PPP1R9AQ9ULJ8 1098 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 CDK17Q00537 523 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 IFT88Q13099 833 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 NUP85Q9BW27 656 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 H3BRJ5 948 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 GH1P01241 217 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 CDC27P30260 824 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 BCAR1P56945 870 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 PRAMEP78395 509 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 CUL1Q13616 776 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 ENOSF1Q7L5Y1 443 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 TADA2BQ86TJ2 420 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 CALR3Q96L12 384 aaKnown RBP15.97■□□□□ 0.15
UBE3B-202ENST00000342494 SMARCAD1Q9H4L7 1026 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 ZNF70Q9UC06 446 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-202ENST00000342494 RARBP10826 455 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 DRAP1Q14919 205 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 ZBTB41Q5SVQ8 909 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 NSUN4Q96CB9 384 aaKnown RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 EGFL8Q99944 293 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 SEC31AO94979 1220 aaKnown RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 ALDH1A1P00352 501 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 SMARCA1P28370 1054 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 HADHAP40939 763 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 LIG3P49916 1009 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 IER5Q5VY09 327 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 PPP4R4Q6NUP7 873 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 TAS2R42Q7RTR8 314 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 ENTPD3O75355 529 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 LCP1P13796 627 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 FOXO4P98177 505 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 TRIM28Q13263 835 aaKnown RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 GLE1Q53GS7 698 aaKnown RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 C6orf118Q5T5N4 469 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 STAG2Q8N3U4 1231 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 TUBB6Q9BUF5 446 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 VPS11Q9H270 941 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 PNPLA7Q6ZV29 1317 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 SHROOM2Q13796 1616 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 NBPF26B4DH59 902 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 F5H423 210 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 XKR3Q5GH77 459 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 NBPF10Q6P3W6 841 aaKnown RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 CRLF3Q8IUI8 442 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 NBPF15Q8N660 670 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-202ENST00000342494 PBXIP1Q96AQ6 731 aa15.96■□□□□ 0.15
UBE3B-202ENST00000342494 A2ML1A8K2U0 1454 aa15.96■□□□□ 0.14
UBE3B-202ENST00000342494 CCL15-CCL14A0A0B4J2E2 113 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 ADCY2Q08462 1091 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 CCL15Q16663 113 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 FAM117BQ6P1L5 589 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 NCLNQ969V3 563 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 EXOC4Q96A65 974 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 RMDN1Q96DB5 314 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 SERPINI1Q99574 410 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 LSM7Q9UK45 103 aaKnown RBP15.95■□□□□ 0.14
UBE3B-202ENST00000342494 GOLGA8MH3BSY2 632 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TMPRSS15P98073 1019 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 NNTQ13423 1086 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TBCCQ15814 346 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 DDX53Q86TM3 631 aaKnown RBP15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TTC17Q96AE7 1141 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 ZNF521Q96K83 1311 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 PP2D1A8MPX8 630 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 SLC8A1P32418 973 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 THEMIS2Q5TEJ8 643 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 ZNF746Q6NUN9 644 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-202ENST00000342494 TRIM72Q6ZMU5 477 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 UPF3AQ9H1J1 476 aaKnown RBP15.95■□□□□ 0.14
UBE3B-202ENST00000342494 NDFIP2Q9NV92 336 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 AFF4Q9UHB7 1163 aaKnown RBP15.95■□□□□ 0.14
UBE3B-202ENST00000342494 SNX24Q9Y343 169 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 KDM6BO15054 1643 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 RFX7Q2KHR2 1363 aa15.95■□□□□ 0.14
UBE3B-202ENST00000342494 ZC3H4Q9UPT8 1303 aaKnown RBP15.95■□□□□ 0.14
UBE3B-202ENST00000342494 ANP32DO95626 131 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms