RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 RBM46Q8TBY0 533 aaKnown RBP16.09■□□□□ 0.17
PKN1-202ENST00000342216 NCSTNQ92542 709 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 GREM2Q9H772 168 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 AJAP1Q9UKB5 411 aaPredicted RBP16.09■□□□□ 0.17
PKN1-202ENST00000342216 MYH3P11055 1940 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 OPHN1O60890 802 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 PTGIRP43119 386 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 MARCKSL1P49006 195 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 RCAN1P53805 252 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 HSPA2P54652 639 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 PLOD1Q02809 727 aaPredicted RBP16.09■□□□□ 0.17
PKN1-202ENST00000342216 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 CTTNQ14247 550 aaKnown RBP16.09■□□□□ 0.17
PKN1-202ENST00000342216 EAPPQ56P03 285 aaPredicted RBP16.09■□□□□ 0.17
PKN1-202ENST00000342216 SV2BQ7L1I2 683 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 SLFN11Q7Z7L1 901 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 SPATA5Q8NB90 893 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 STMN2Q93045 179 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 CYTH2Q99418 400 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 CENPKQ9BS16 269 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 ZFP69BQ9UJL9 534 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
PKN1-202ENST00000342216 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.171e-10■■■■□ 24.3
PKN1-202ENST00000342216 ECE2O60344 883 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 CCNT1O60563 726 aaKnown RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 EXOC3O60645 756 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 RARGP13631 454 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 YARSP54577 528 aaKnown RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 GALCP54803 685 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 WDR4P57081 412 aaKnown RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 AMPD3Q01432 767 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 KYNUQ16719 465 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 MFSD4BQ5TF39 518 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 MTDHQ86UE4 582 aaKnown RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 ZDHHC14Q8IZN3 488 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 PHF12Q96QT6 1004 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 HAPLN3Q96S86 360 aa16.08■□□□□ 0.17
PKN1-202ENST00000342216 ASCC2Q9H1I8 757 aaPredicted RBP16.08■□□□□ 0.17
PKN1-202ENST00000342216 A0A0J9YVX5 310 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.08■□□□□ 0.16
PKN1-202ENST00000342216 FAM187AA6NFU0 413 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 PTPN4P29074 926 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 CHKAP35790 457 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 LRRC63Q05C16 580 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 ARHGAP18Q8N392 663 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 SLC35G2Q8TBE7 412 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 SH3TC2Q8TF17 1288 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 NAT14Q8WUY8 206 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 SLX1AQ9BQ83 275 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 TMEM109Q9BVC6 243 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 UBN1Q9NPG3 1134 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 CHORDC1Q9UHD1 332 aaPredicted RBP16.08■□□□□ 0.16
PKN1-202ENST00000342216 DCTN4Q9UJW0 460 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 COMMD3-BMI1R4GMX3 469 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 TCRBV7S2A1N4TA0A589 114 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 VAV1P15498 845 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 GALK1P51570 392 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 AP1B1Q10567 949 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 THOC5Q13769 683 aaKnown RBP16.08■□□□□ 0.16
PKN1-202ENST00000342216 CHRNA2Q15822 529 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 SATL1Q86VE3 508 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 DDX18Q9NVP1 670 aaKnown RBP16.08■□□□□ 0.16
PKN1-202ENST00000342216 PCDHA6Q9UN73 950 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 PCDHA4Q9UN74 947 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 PCDHA8Q9Y5H6 950 aa16.08■□□□□ 0.16
PKN1-202ENST00000342216 TPD52L2O43399 206 aaKnown RBP16.07■□□□□ 0.16
PKN1-202ENST00000342216 RNASEH1O60930 286 aaKnown RBP16.07■□□□□ 0.16
PKN1-202ENST00000342216 USP1O94782 785 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 RPL13P26373 211 aaKnown RBP16.07■□□□□ 0.16
PKN1-202ENST00000342216 PPP1R2P41236 205 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 TXKP42681 527 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 STRN3Q13033 797 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 ZRSR2Q15696 482 aaKnown RBP16.07■□□□□ 0.16
PKN1-202ENST00000342216 CCDC137Q6PK04 289 aaKnown RBP16.07■□□□□ 0.16
PKN1-202ENST00000342216 ARHGEF18Q6ZSZ5 1173 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 ADGRA1Q86SQ6 560 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 CCDC105Q8IYK2 499 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 RNF168Q8IYW5 571 aaPredicted RBP16.07■□□□□ 0.16
PKN1-202ENST00000342216 SYCE1Q8N0S2 351 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 PRELID2Q8N945 189 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 UIMC1Q96RL1 719 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 SLC4A7Q9Y6M7 1214 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 AMPD1P23109 780 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 GRIA2P42262 883 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 CDK7P50613 346 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
PKN1-202ENST00000342216 PPP2R5BQ15173 497 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 LRRC36Q1X8D7 754 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 UNC13DQ70J99 1090 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 HEATR3Q7Z4Q2 680 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 CROCCP2Q86T23 111 aa16.07■□□□□ 0.16
PKN1-202ENST00000342216 BLOC1S4Q9NUP1 217 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms