RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 TMEM143Q96AN5 459 aa14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 LXNQ9BS40 222 aa14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 EMILIN2Q9BXX0 1053 aa14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 RSAD1Q9HA92 442 aa14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 ORC3Q9UBD5 711 aaPredicted RBP14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 DBR1Q9UK59 544 aaKnown RBP14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 SSX2IPQ9Y2D8 614 aa14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 FAN1Q9Y2M0 1017 aa14.58□□□□□ -0.08
NECTIN1-203ENST00000341398 EIF5BO60841 1220 aaKnown RBP14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 SP100P23497 879 aaPredicted RBP14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 KRT2P35908 639 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 ANAPC15P60006 121 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 MTMR3Q13615 1198 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 TFDP1Q14186 410 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 RARS2Q5T160 578 aaKnown RBP14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 CABP7Q86V35 215 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 TPH2Q8IWU9 490 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 RNF149Q8NC42 400 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 HAS1Q92839 578 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 DYDC2Q96IM9 177 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 CCDC43Q96MW1 224 aaKnown RBP14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 MTRQ99707 1265 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 TMEM175Q9BSA9 504 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 POMKQ9H5K3 350 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 PCDHA12Q9UN75 941 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 SORCS3Q9UPU3 1222 aa14.57□□□□□ -0.08
NECTIN1-203ENST00000341398 NR1I2O75469 434 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 ITGA4P13612 1032 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 KLRC2P26717 231 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 SLC11A1P49279 550 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 EMC2Q15006 297 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 KIAA1841Q6NSI8 718 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 ELMSAN1Q6PJG2 1045 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 AGMOQ6ZNB7 445 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 HACE1Q8IYU2 909 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 TDRD5Q8NAT2 981 aaKnown RBP14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 KREMEN2Q8NCW0 462 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 AUTS2Q8WXX7 1259 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 ACSF2Q96CM8 615 aaPredicted RBP14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 ASIC4Q96FT7 647 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 MRPL17Q9NRX2 175 aaKnown RBP14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 RGL1Q9NZL6 768 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 DNAJB4Q9UDY4 337 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 DPP7Q9UHL4 492 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 TPCN1Q9ULQ1 816 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 USTQ9Y2C2 406 aa14.56□□□□□ -0.08
NECTIN1-203ENST00000341398 MEIS3P2A8K0S8 358 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 NCLP19338 710 aaKnown RBP14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 AVPR2P30518 371 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 NUBP1P53384 320 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 CYP4A11Q02928 519 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 POU5F1BQ06416 359 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 TRIM29Q14134 588 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 CTTNQ14247 550 aaKnown RBP14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 IER5LQ5T953 404 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 NOTUMQ6P988 496 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 TMEM173Q86WV6 379 aaPredicted RBP14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 ZNF280BQ86YH2 543 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 POTEDQ86YR6 584 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 ZDHHC14Q8IZN3 488 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 OXER1Q8TDS5 423 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 SLC22A17Q8WUG5 538 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 CCDC51Q96ER9 411 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 WRAP73Q9P2S5 460 aaPredicted RBP14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 ZDBF2Q9HCK1 2354 aa14.55□□□□□ -0.08
NECTIN1-203ENST00000341398 TDRD15B5MCY1 1934 aaKnown RBP14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 C2CD4DB7Z1M9 353 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 NRP1O14786 923 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 DGAT1O75907 488 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 DDHD2O94830 711 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 SLITRK3O94933 977 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 EPCAMP16422 314 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 HOXA11P31270 313 aaPredicted RBP14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 PTPN14Q15678 1187 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 CALCRLQ16602 461 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 C12orf76Q8N812 135 aaPredicted RBP14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 PRSS33Q8NF86 280 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 EIF2AK1Q9BQI3 630 aaKnown RBP14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 TRIM6Q9C030 488 aaPredicted RBP14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 MINDY3Q9H8M7 445 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 SFXN1Q9H9B4 322 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 GJB4Q9NTQ9 266 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 ANKEF1Q9NU02 776 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 ARID2Q68CP9 1835 aa14.54□□□□□ -0.08
NECTIN1-203ENST00000341398 INO80B-WBP1J3KQ70 363 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 POMCP01189 267 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 SSBP05455 408 aaKnown RBP eCLIP14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 URODP06132 367 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 AK2P54819 239 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 PTENP60484 403 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 TMC5Q6UXY8 1006 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 OTOP3Q7RTS5 596 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 KLHL5Q96PQ7 755 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 LIMD1Q9UGP4 676 aa14.53□□□□□ -0.08
NECTIN1-203ENST00000341398 KMT2EQ8IZD2 1858 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 LYPLA2O95372 231 aa14.52□□□□□ -0.08
NECTIN1-203ENST00000341398 SOD2P04179 222 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms