RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 ATXN7L3BQ96GX2 97 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 CHRNA5P30532 468 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 SFNP31947 248 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 NNMTP40261 264 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 TBCCQ15814 346 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 FAM47EQ6ZV65 393 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 DHX35Q9H5Z1 703 aaKnown RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
TNC-201ENST00000341037 IP6K2Q9UHH9 426 aa12.12□□□□□ -0.47
TNC-201ENST00000341037 CTIFO43310 598 aaKnown RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 FAM102AQ5T9C2 384 aaPredicted RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 NFRKBQ6P4R8 1299 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 CCNYL1Q8N7R7 359 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 ASIC4Q96FT7 647 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 CYP26B1Q9NR63 512 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 KLHL11Q9NVR0 708 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 HMGB1P1B2RPK0 211 aaPredicted RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 E2F6O75461 281 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 TBXAS1P24557 533 aaPredicted RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 GPS1Q13098 491 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 HEATR6Q6AI08 1181 aaKnown RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 SCG3Q8WXD2 468 aaKnown RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 SH3KBP1Q96B97 665 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 ULK4Q96C45 1275 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 SPON2Q9BUD6 331 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 TRIM55Q9BYV6 548 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 HOXD10P28358 340 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 KRT39Q6A163 491 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 STAG2Q8N3U4 1231 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 SLC7A5P2Q9GIP4 190 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 F5H6K3 240 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 TADA3O75528 432 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 KLRC3Q07444 240 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 EFHC2Q5JST6 749 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 PSMC5P62195 406 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 SLC13A1Q9BZW2 595 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 FGFR1OP2Q9NVK5 253 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 KIF17Q9P2E2 1029 aa12.11□□□□□ -0.47
TNC-201ENST00000341037 APOBEC2Q9Y235 224 aaKnown RBP12.11□□□□□ -0.47
TNC-201ENST00000341037 DNAJC6O75061 913 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 SULT1E1P49888 294 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 PMS2P54278 862 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 TBC1D1Q86TI0 1168 aaPredicted RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 DDX53Q86TM3 631 aaKnown RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 PROM2Q8N271 834 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 ABTB1Q969K4 478 aaPredicted RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 FAM20AQ96MK3 541 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 TRIM49P0CI25 452 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 TRIM49CP0CI26 452 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 HMGCS2P54868 508 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 BEND6Q5SZJ8 279 aaPredicted RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 SFMBT1Q9UHJ3 866 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 SPAG7O75391 227 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 PPP1R36Q96LQ0 422 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 SLC9A2Q9UBY0 812 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 TEKT2Q9UIF3 430 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 PREX2Q70Z35 1606 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 LAMC1P11047 1609 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 AKR1B1P15121 316 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 SMARCA1P28370 1054 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 BTBD8Q5XKL5 378 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 ZFP69BQ9UJL9 534 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 PIN4Q9Y237 131 aaKnown RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 TFDP2Q14188 446 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 YAF2Q8IY57 180 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 EMSYQ7Z589 1322 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 KCNQ2O43526 872 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 PFDN1O60925 122 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 SH3BGRP55822 239 aaPredicted RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 ACBD5Q5T8D3 534 aaPredicted RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 MB21D2Q8IYB1 491 aaPredicted RBP12.1□□□□□ -0.47
TNC-201ENST00000341037 AGR3Q8TD06 166 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 RAET1EQ8TD07 263 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 ACAP3Q96P50 834 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 CASS4Q9NQ75 786 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 DONSONQ9NYP3 566 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 SCOCQ9UIL1 159 aa12.1□□□□□ -0.47
TNC-201ENST00000341037 STAP1Q9ULZ2 295 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms