RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 AGBL2Q5U5Z8 902 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 CYB5D1Q6P9G0 228 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 C1orf186Q6ZWK4 172 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 OTOP1Q7RTM1 612 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 SLFN11Q7Z7L1 901 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 FAM198AQ9UFP1 575 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 CCDC169A6NNP5 214 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 Q4G0T1 1027 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 CAPN12Q6ZSI9 719 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 SEPT14Q6ZU15 432 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 PARP9Q8IXQ6 854 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 ANKS4BQ8N8V4 417 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 ATG4AQ8WYN0 398 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 ZKSCAN4Q969J2 545 aaPredicted RBP15.51■□□□□ 0.07
CPSF7-201ENST00000340437 DDX23Q9BUQ8 820 aaKnown RBP15.51■□□□□ 0.07
CPSF7-201ENST00000340437 HEMGNQ9BXL5 484 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 LAMB2P55268 1798 aa15.51■□□□□ 0.07
CPSF7-201ENST00000340437 CLDN3O15551 220 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 PPP3CAQ08209 521 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 MAPK7Q13164 816 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 HP1BP3Q5SSJ5 553 aaPredicted RBP15.5■□□□□ 0.07
CPSF7-201ENST00000340437 TTC27Q6P3X3 843 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 STXBP4Q6ZWJ1 553 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 ZNF653Q96CK0 615 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 NCAPGQ9BPX3 1015 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 KIFC3Q9BVG8 833 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 UNC45AQ9H3U1 944 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 TNRC6CQ9HCJ0 1690 aaKnown RBP15.5■□□□□ 0.07
CPSF7-201ENST00000340437 RASGRF2O14827 1237 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 POLR2MP0CAP2 368 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 CREB1P16220 341 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 CALCOCO2Q13137 446 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 SP8Q8IXZ3 490 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 PRELID2Q8N945 189 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 PABPC3Q9H361 631 aaKnown RBP15.5■□□□□ 0.07
CPSF7-201ENST00000340437 NYAP2Q9P242 653 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 STK38LQ9Y2H1 464 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 ZMYM2Q9UBW7 1377 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 DRD4P21917 467 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 DUPD1Q68J44 220 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 SLC47A2Q86VL8 602 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 CCDC50Q8IVM0 306 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 TATDN2Q93075 761 aa15.5■□□□□ 0.07
CPSF7-201ENST00000340437 COL16A1Q07092 1604 aaPredicted RBP15.5■□□□□ 0.07
CPSF7-201ENST00000340437 CES2O00748 559 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 KIAA0391O15091 583 aaKnown RBP15.49■□□□□ 0.07
CPSF7-201ENST00000340437 SLC16A4O15374 487 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 STAT2P52630 851 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 SMTNP53814 917 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 RRP1BQ14684 758 aaKnown RBP15.49■□□□□ 0.07
CPSF7-201ENST00000340437 PADI6Q6TGC4 694 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 TMEM179Q6ZVK1 233 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 HSD17B14Q9BPX1 270 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 NUP85Q9BW27 656 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.49■□□□□ 0.078e-6■■□□□ 11.4
CPSF7-201ENST00000340437 CTNNAL1Q9UBT7 734 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 CHUKO15111 745 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 NF2P35240 595 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 PRELPP51888 382 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 GPC5P78333 572 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 PPATQ06203 517 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 LLGL2Q6P1M3 1020 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 FOXR2Q6PJQ5 311 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 ZC3H3Q8IXZ2 948 aaKnown RBP15.49■□□□□ 0.07
CPSF7-201ENST00000340437 FUKQ8N0W3 1084 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 DHX38Q92620 1227 aaKnown RBP15.49■□□□□ 0.07
CPSF7-201ENST00000340437 NACC1Q96RE7 527 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 CARD9Q9H257 536 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 SMCHD1A6NHR9 2005 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 GSTTP1A0A1W2PQM5 241 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 APBA3O96018 575 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 VAMP7P51809 220 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 C6orf89Q6UWU4 347 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 MIER3Q7Z3K6 550 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 ZDHHC14Q8IZN3 488 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 POLR3CQ9BUI4 534 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-201ENST00000340437 GPR88Q9GZN0 384 aa15.49■□□□□ 0.07
CPSF7-201ENST00000340437 CTDP1Q9Y5B0 961 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-201ENST00000340437 A0A0A6YYK5 440 aaPredicted RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 TBX3O15119 743 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PEX3P56589 373 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 VPS72Q15906 364 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 LMBRD2Q68DH5 695 aaPredicted RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PRUNE1Q86TP1 453 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PCDHB18PQ96TA0 734 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 DNAJC5Q9H3Z4 198 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 TPX2Q9ULW0 747 aaKnown RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 USTQ9Y2C2 406 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 USP20Q9Y2K6 914 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PLIN4Q96Q06 1357 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 IPO5O00410 1097 aaKnown RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PPFIA2O75334 1257 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 HOXA7P31268 230 aaPredicted RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PRKG1Q13976 671 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 KIF2BQ8N4N8 673 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PI4K2AQ9BTU6 479 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 QTRT2Q9H974 415 aaKnown RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms