RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 CBX6O95503 412 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 FGRP09769 529 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 ITGA4P13612 1032 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 COPB2P35606 906 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 TFAP4Q01664 338 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 CALCOCO2Q13137 446 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 LONRF1Q17RB8 773 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 KCTD21Q4G0X4 260 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 RAB3IL1Q8TBN0 382 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 RMDN2Q96LZ7 410 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 TBC1D10AQ9BXI6 508 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 SUCLA2Q9P2R7 463 aaPredicted RBP9.95□□□□□ -0.82
RPGR-202ENST00000339363 PLAGL2Q9UPG8 496 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 ZNF804BA4D1E1 1349 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 CCDC188H7C350 402 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 GYG2O15488 501 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 EVA1CP58658 441 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 DR1Q01658 176 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 EAPPQ56P03 285 aaPredicted RBP9.95□□□□□ -0.82
RPGR-202ENST00000339363 KLC3Q6P597 504 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 SESTD1Q86VW0 696 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 TMTC2Q8N394 836 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 MARCH10Q8NA82 808 aaPredicted RBP9.95□□□□□ -0.82
RPGR-202ENST00000339363 ATL2Q8NHH9 583 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 LZICQ8WZA0 190 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 ABHD8Q96I13 439 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 PFDN4Q9NQP4 134 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 BTG4Q9NY30 223 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 NIP7Q9Y221 180 aaKnown RBP eCLIP9.95□□□□□ -0.82
RPGR-202ENST00000339363 R3HDM2Q9Y2K5 976 aaKnown RBP9.95□□□□□ -0.82
RPGR-202ENST00000339363 COMMD3-BMI1R4GMX3 469 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 A0A1B0GUL6 1792 aa9.95□□□□□ -0.82
RPGR-202ENST00000339363 PALM3A6NDB9 673 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 CAMTA2O94983 1202 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZNF24P17028 368 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 R3HDM1Q15032 1099 aaKnown RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 USP17L2Q6R6M4 530 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 DTHD1Q6ZMT9 781 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 LRRC74BQ6ZQY2 392 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 TRIM67Q6ZTA4 783 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZNF554Q86TJ5 538 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 VPS36Q86VN1 386 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 PTPRN2Q92932 1015 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 MYLK2Q9H1R3 596 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 SAP30BPQ9UHR5 308 aaKnown RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 TDRKHQ9Y2W6 561 aaKnown RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 A6NJR5 290 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ADCY3O60266 1144 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 CIB2O75838 187 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 GNA14O95837 355 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 TROVE2P10155 538 aaKnown RBP eCLIP9.94□□□□□ -0.82
RPGR-202ENST00000339363 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 ISLR2Q6UXK2 745 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZNF662Q6ZS27 426 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZSCAN29Q8IWY8 852 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 SRRM1Q8IYB3 904 aaKnown RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZBTB8BQ8NAP8 495 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 PHC3Q8NDX5 983 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 UBA5Q9GZZ9 404 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZHX3Q9H4I2 956 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 AJAP1Q9UKB5 411 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 SUGT1Q9Y2Z0 365 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 RTL9Q8NET4 1388 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 BCL9O00512 1426 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 TSPY2A6NKD2 308 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 O00370 1275 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 KRT36O76013 467 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ADAMTS2O95450 1211 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 BAG3O95817 575 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 PYGMP11217 842 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ACTN1P12814 892 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 TMED10P49755 219 aaKnown RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 PSMD7P51665 324 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 IL9RQ01113 521 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 LLGL1Q15334 1064 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ASIC2Q16515 512 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 LIN52Q52LA3 116 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZC2HC1CQ53FD0 456 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 CCDC62Q6P9F0 684 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ATP11CQ8NB49 1132 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 PNMA5Q96PV4 448 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 LSM14BQ9BX40 385 aaKnown RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 SPATA16Q9BXB7 569 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 RNF41Q9H4P4 317 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 BTBD7Q9P203 1132 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZFP69BQ9UJL9 534 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 PCDHA4Q9UN74 947 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 MINPP1Q9UNW1 487 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 PTPN22Q9Y2R2 807 aa9.94□□□□□ -0.82
RPGR-202ENST00000339363 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
RPGR-202ENST00000339363 A0A087X0T9 212 aa9.93□□□□□ -0.82
RPGR-202ENST00000339363 H0YGN5 161 aa9.93□□□□□ -0.82
RPGR-202ENST00000339363 ITGA2BP08514 1039 aa9.93□□□□□ -0.82
RPGR-202ENST00000339363 FAM228BP0C875 321 aa9.93□□□□□ -0.82
RPGR-202ENST00000339363 CCDC166P0CW27 439 aa9.93□□□□□ -0.82
RPGR-202ENST00000339363 CRKLP46109 303 aaKnown RBP9.93□□□□□ -0.82
RPGR-202ENST00000339363 BTKQ06187 659 aa9.93□□□□□ -0.82
RPGR-202ENST00000339363 CCDC15Q0P6D6 951 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms