RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 LRRC57Q8N9N7 239 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 TPCN2Q8NHX9 752 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 GPRASP2Q96D09 838 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 KRT12Q99456 494 aa25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 MAP3K20Q9NYL2 800 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-201ENST00000337392 FERP16591 822 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 SEZ6Q53EL9 994 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 CCNI2Q6ZMN8 369 aaPredicted RBP25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 INTS8Q75QN2 995 aaKnown RBP25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 DAAM2Q86T65 1068 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 SLC30A5Q8TAD4 765 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 FBXL5Q9UKA1 691 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 C19orf81C9J6K1 198 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 PAFAH1B1P43034 410 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 NCAPG2Q86XI2 1143 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 GOLGA5Q8TBA6 731 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 VPS18Q9P253 973 aa25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 BZW2Q9Y6E2 419 aaKnown RBP25.06■■□□□ 1.6
CLPTM1-201ENST00000337392 HNRNPDLO14979 420 aaKnown RBP25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 PGK2P07205 417 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 PRLRP16471 622 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 MXI1P50539 228 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 TMEM63BQ5T3F8 832 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 ADAT2Q7Z6V5 191 aaKnown RBP25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 CPNE8Q86YQ8 564 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 POMGNT1Q8WZA1 660 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 ZNF668Q96K58 619 aaPredicted RBP25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 SELENOOQ9BVL4 669 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 GINM1Q9NU53 330 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 FAN1Q9Y2M0 1017 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 SGPL1O95470 568 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 SLC35G2Q8TBE7 412 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 TAS1R2Q8TE23 839 aa25.05■■□□□ 1.6
CLPTM1-201ENST00000337392 ATP8B1O43520 1251 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 CEP104O60308 925 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 LMNB1P20700 586 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 GABPB1Q06547 395 aaPredicted RBP25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 CFAP221Q4G0U5 840 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 EPC2Q52LR7 807 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 ABHD15Q6UXT9 468 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 MMGT1Q8N4V1 131 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 ZBTB45Q96K62 511 aaPredicted RBP25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 KREMEN1Q96MU8 473 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 FAM213AQ9BRX8 229 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 SYT11Q9BT88 431 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 POLR3FQ9H1D9 316 aaPredicted RBP25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 CYP26B1Q9NR63 512 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 COG5Q9UP83 839 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 LOXHD1Q8IVV2 1947 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 MYH9P35579 1960 aaKnown RBP25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 BUB1BO60566 1050 aaPredicted RBP25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 RPS6KA1Q15418 735 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 NAA35Q5VZE5 725 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 C8orf74Q6P047 294 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 SLC47A2Q86VL8 602 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 ZBTB10Q96DT7 871 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 BICD1Q96G01 975 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 HOXC10Q9NYD6 342 aa25.04■■□□□ 1.6
CLPTM1-201ENST00000337392 CYP26A1O43174 497 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 COPB2P35606 906 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 DRP2Q13474 957 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 METTL13Q8N6R0 699 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 RPGRIP1Q96KN7 1286 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 ANKEF1Q9NU02 776 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 KIF4AO95239 1232 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 MAPTP10636 758 aaKnown RBP25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 SMTNP53814 917 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 AADACL2Q6P093 401 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 MAP4K3Q8IVH8 894 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 IFT81Q8WYA0 676 aa25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 FHDC1Q9C0D6 1143 aaPredicted RBP25.03■■□□□ 1.6
CLPTM1-201ENST00000337392 EDN1P05305 212 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 PSAPP07602 524 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 ITGA4P13612 1032 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 CARSP49589 748 aaKnown RBP25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 ZBTB41Q5SVQ8 909 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 SND1Q7KZF4 910 aaKnown RBP eCLIP25.02■■□□□ 1.65e-7■■■□□ 15.9
CLPTM1-201ENST00000337392 VPS36Q86VN1 386 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 TRIM50Q86XT4 487 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 TATDN2Q93075 761 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 RNF181Q9P0P0 153 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 SPATA31C2B4DYI2 1134 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 TNFAIP3P21580 790 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 SSTR3P32745 418 aaPredicted RBP25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 ACOT2P49753 483 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 ATP6V0A1Q93050 837 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 PCDHB18PQ96TA0 734 aa25.02■■□□□ 1.6
CLPTM1-201ENST00000337392 MARK3P27448 753 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 GUCY2DQ02846 1103 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 LLGL1Q15334 1064 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 SUPT20HL1Q3ZLR7 823 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 PEX26Q7Z412 305 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 RPUSD2Q8IZ73 545 aaKnown RBP25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 PARD3BQ8TEW8 1205 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 NR2E1Q9Y466 385 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 TTLL13PA6NNM8 815 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 TMEM110-MUSTN1A8MSY1 372 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 FAM153BP0C7A2 387 aa25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 HARSP12081 509 aaKnown RBP25.01■■□□□ 1.59
CLPTM1-201ENST00000337392 LY6KQ17RY6 165 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms