RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 ATL2Q8NHH9 583 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 RIN2Q8WYP3 895 aaPredicted RBP7.86□□□□□ -1.15
EPHA3-201ENST00000336596 HDAC11Q96DB2 347 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 RBM41Q96IZ5 413 aaKnown RBP7.86□□□□□ -1.15
EPHA3-201ENST00000336596 SPATA16Q9BXB7 569 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 MYPNQ86TC9 1320 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 SYNJ2BP-COX16A0A087WUM0 186 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 PRMT3O60678 531 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 ATXN3P54252 364 aaPredicted RBP7.86□□□□□ -1.15
EPHA3-201ENST00000336596 TDRD10Q5VZ19 366 aaKnown RBP7.86□□□□□ -1.15
EPHA3-201ENST00000336596 SDCCAG8Q86SQ7 713 aaPredicted RBP7.86□□□□□ -1.15
EPHA3-201ENST00000336596 XXYLT1Q8NBI6 393 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 OR8K1Q8NGG5 319 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 CSGALNACT1Q8TDX6 532 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 MORC4Q8TE76 937 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 MED15Q96RN5 788 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 COX16Q9P0S2 106 aa7.86□□□□□ -1.15
EPHA3-201ENST00000336596 SLIT2O94813 1529 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CYP2C9P11712 490 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 GARTP22102 1010 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 EPHB3P54753 998 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 DENND2CQ68D51 928 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 SWSAP1Q6NVH7 229 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 PATL1Q86TB9 770 aaKnown RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 SRBD1Q8N5C6 995 aaKnown RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 ASAP3Q8TDY4 903 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 STMN2Q93045 179 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 EMILIN3Q9NT22 766 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 DDX56Q9NY93 547 aaKnown RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 UXTQ9UBK9 157 aaPredicted RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 TRIM17Q9Y577 477 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 MYO1DO94832 1006 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 RASA1P20936 1047 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CDC27P30260 824 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 GRIK1P39086 918 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 TERF1P54274 439 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CES5AQ6NT32 575 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CCNYQ8ND76 341 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 DNERQ8NFT8 737 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 SDCCAG3Q96C92 435 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CHMP6Q96FZ7 201 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 EHD4Q9H223 541 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 ZNF197O14709 1029 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 ADCY8P40145 1251 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 FAM43BQ6ZT52 329 aaPredicted RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 FRA10AC1Q70Z53 315 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CLEC10AQ8IUN9 316 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 SCFD1Q8WVM8 642 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 MRPS31Q92665 395 aaKnown RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 GJA10Q969M2 543 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 KIF12Q96FN5 646 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 EPSTI1Q96J88 318 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 SLITRK1Q96PX8 696 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 DNAI1Q9UI46 699 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 TLK1Q9UKI8 766 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 KIF3CO14782 793 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 NDUFB10O96000 172 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 USP17L6PQ6QN14 398 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CCDC186Q7Z3E2 898 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 ADAT2Q7Z6V5 191 aaKnown RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 ELOA2Q8IYF1 753 aaPredicted RBP7.85□□□□□ -1.15
EPHA3-201ENST00000336596 ZNF653Q96CK0 615 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 ZBTB18Q99592 522 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 FAM129AQ9BZQ8 928 aa7.85□□□□□ -1.15
EPHA3-201ENST00000336596 CCDC85CA6NKD9 419 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 AXLP30530 894 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 APLP1P51693 650 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 NDUFA8P51970 172 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 PEX3P56589 373 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 STARD3Q14849 445 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 PHKG1Q16816 387 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RWDD4Q6NW29 188 aaKnown RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RGMBQ6NW40 437 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 CCDC121Q6ZUS5 278 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 CDKL3Q8IVW4 592 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 RHOT2Q8IXI1 618 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 CEP120Q8N960 986 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 EPAS1Q99814 870 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 KIAA1468Q9P260 1216 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 NFE2L3Q9Y4A8 694 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 PVALEFA0A1B0GWK0 134 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 DDNO94850 711 aaPredicted RBP7.84□□□□□ -1.15
EPHA3-201ENST00000336596 BRAFP15056 766 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 KRT15P19012 456 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 ETFBP38117 255 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 CDR2Q01850 454 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 AP1B1Q10567 949 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 DUOXA2Q1HG44 320 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 BSPRYQ5W0U4 402 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 HERC6Q8IVU3 1022 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 STAG2Q8N3U4 1231 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 PBXIP1Q96AQ6 731 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 ARL8AQ96BM9 186 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 VCX3BQ9H321 246 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 C17orf75Q9HAS0 396 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 SLC25A13Q9UJS0 675 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 PCDHB6Q9Y5E3 794 aa7.84□□□□□ -1.15
EPHA3-201ENST00000336596 LMO7Q8WWI1 1683 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms