RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SH2D3AQ9BRG2 576 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 CCDC68Q9H2F9 335 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 RGPD8O14715 1765 aaPredicted RBP12.03□□□□□ -0.48
POLR1B-202ENST00000333990 TRIM49P0CI25 452 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 TRIM49CP0CI26 452 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 NPEPPSP55786 919 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 GPC5P78333 572 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 TFDP2Q14188 446 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 GEN1Q17RS7 908 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 ATF7IP2Q5U623 682 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 NOTUMQ6P988 496 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 KCTD6Q8NC69 237 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 MYRIPQ8NFW9 859 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 CDKL2Q92772 493 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 PPP1R13BQ96KQ4 1090 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
POLR1B-202ENST00000333990 CYP26B1Q9NR63 512 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 SPTLC3Q9NUV7 552 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 SEPT10Q9P0V9 454 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 GLTPD2A6NH11 291 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 PGK2P07205 417 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 GNA15P30679 374 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 TMEM132DQ14C87 1099 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 PTPROQ16827 1216 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 SGO2Q562F6 1265 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 CEP57Q86XR8 500 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 EFCAB13Q8IY85 973 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 CCNYQ8ND76 341 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 UNC45AQ9H3U1 944 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 ASNSD1Q9NWL6 643 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
POLR1B-202ENST00000333990 CACNA1FO60840 1977 aa12.03□□□□□ -0.48
POLR1B-202ENST00000333990 ACTN1P12814 892 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 ITGA4P13612 1032 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 PSMA2P25787 234 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 RWDD2BP57060 319 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 CYP27A1Q02318 531 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 KRT71Q3SY84 523 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 EFCC1Q9HA90 598 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 ABHD10Q9NUJ1 306 aa12.02□□□□□ -0.48
POLR1B-202ENST00000333990 DIS3Q9Y2L1 958 aaKnown RBP12.02□□□□□ -0.48
POLR1B-202ENST00000333990 LRRC53A6NM62 1247 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 SLC37A4O43826 429 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 CRCPO75575 148 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 MXRA7P84157 204 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 SGSM1Q2NKQ1 1148 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 SOWAHDA6NJG2 315 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 SDC4P31431 198 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 STK4Q13043 487 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 ELF2Q15723 593 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
POLR1B-202ENST00000333990 WDR72Q3MJ13 1102 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 C4orf19Q8IY42 314 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 ACRBPQ8NEB7 543 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 RBM41Q96IZ5 413 aaKnown RBP12.02□□□□□ -0.49
POLR1B-202ENST00000333990 LIMA1Q9UHB6 759 aaKnown RBP12.02□□□□□ -0.49
POLR1B-202ENST00000333990 P4HA2O15460 535 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
POLR1B-202ENST00000333990 MYBL1P10243 752 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 CPB1P15086 417 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 ZNF18P17022 549 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.49
POLR1B-202ENST00000333990 FBF1Q8TES7 1133 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 FAM114A2Q9NRY5 505 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 VPS18Q9P253 973 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 AGAP1Q9UPQ3 857 aa12.02□□□□□ -0.49
POLR1B-202ENST00000333990 SGK1O00141 431 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 GTF2F1P35269 517 aaKnown RBP eCLIP12.01□□□□□ -0.49
POLR1B-202ENST00000333990 IRX5P78411 483 aaPredicted RBP12.01□□□□□ -0.49
POLR1B-202ENST00000333990 NOGQ13253 232 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 BFSP2Q13515 415 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 SETDB1Q15047 1291 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 LRRC31Q6UY01 552 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 ADAT2Q7Z6V5 191 aaKnown RBP12.01□□□□□ -0.49
POLR1B-202ENST00000333990 LRRC71Q8N4P6 559 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 MRRFQ96E11 262 aaKnown RBP12.01□□□□□ -0.49
POLR1B-202ENST00000333990 ARP10275 920 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 ERVK-24P63145 666 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 DCAF4L1Q3SXM0 396 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 NAA35Q5VZE5 725 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 TTC13Q8NBP0 860 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 EHD2Q9NZN4 543 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 ANAPC7Q9UJX3 599 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 NPHP3-ACAD11A0A0J9YXS1 232 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 M0QYV0 167 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 CLTAP09496 248 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 STAG3L1P0CL83 205 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 NAMPTP43490 491 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 TAP1Q03518 808 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 PTPAQ15257 358 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 PKN1Q16512 942 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 HHATQ5VTY9 493 aa12.01□□□□□ -0.49
POLR1B-202ENST00000333990 FBXO16Q8IX29 292 aaPredicted RBP12.01□□□□□ -0.49
POLR1B-202ENST00000333990 RNF10Q8N5U6 811 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms