RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 GOLGA6L4A6NEF3 574 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 SLFN14P0C7P3 912 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 CASP1P29466 404 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 EFNA5P52803 228 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 NCKAP1LP55160 1127 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 FAM189BP81408 668 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 MAPK6Q16659 721 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 UBXN11Q5T124 520 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 TWF2Q6IBS0 349 aaKnown RBP23.08■■□□□ 1.29
YBX1-202ENST00000332220 SFR1Q86XK3 245 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 TMEM87AQ8NBN3 555 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 TMEM161BQ8NDZ6 487 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 FIZ1Q96SL8 496 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 ZBED2Q9BTP6 218 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 TRIM9Q9C026 710 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 DACT1Q9NYF0 836 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 PCDHA11Q9Y5I1 949 aa23.08■■□□□ 1.29
YBX1-202ENST00000332220 CNTNAP2Q9UHC6 1331 aa23.08■■□□□ 1.28
YBX1-202ENST00000332220 K7ERI5 159 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 TLL1O43897 1013 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 GADD45BO75293 160 aaPredicted RBP23.07■■□□□ 1.28
YBX1-202ENST00000332220 IDEP14735 1019 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 ATF7P17544 494 aaPredicted RBP23.07■■□□□ 1.28
YBX1-202ENST00000332220 AXLP30530 894 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 AFMP43652 599 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 SMTNP53814 917 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 CDR2LQ86X02 465 aaPredicted RBP23.07■■□□□ 1.28
YBX1-202ENST00000332220 ECHDC2Q86YB7 292 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 NPAS4Q8IUM7 802 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 CEP57L1Q8IYX8 460 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 PRIMPOLQ96LW4 560 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 TMEM134Q9H6X4 195 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 PDCD11Q14690 1871 aaKnown RBP23.07■■□□□ 1.28
YBX1-202ENST00000332220 CHD9Q3L8U1 2897 aa23.07■■□□□ 1.28
YBX1-202ENST00000332220 A0A0U1RQF3 1178 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 FRMD3A2A2Y4 597 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 LCHNA4D1U4 455 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 ACKR2O00590 384 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 TRAK2O60296 914 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 MAPTP10636 758 aaKnown RBP23.06■■□□□ 1.28
YBX1-202ENST00000332220 DNAJB2P25686 324 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 NMT1P30419 496 aaKnown RBP23.06■■□□□ 1.28
YBX1-202ENST00000332220 FXR1P51114 621 aaKnown RBP eCLIP23.06■■□□□ 1.28
YBX1-202ENST00000332220 HTRA4P83105 476 aaPredicted RBP23.06■■□□□ 1.28
YBX1-202ENST00000332220 PRPF4BQ13523 1007 aaKnown RBP23.06■■□□□ 1.28
YBX1-202ENST00000332220 CSPP1Q1MSJ5 1256 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 NT5DC1Q5TFE4 455 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 NOTUMQ6P988 496 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 HAUS6Q7Z4H7 955 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 C7orf25Q9BPX7 421 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 TRAIPQ9BWF2 469 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 LRRC27Q9C0I9 530 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 BLZF1Q9H2G9 400 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 FAM105AQ9NUU6 356 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 USP25Q9UHP3 1055 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 KCNG1Q9UIX4 513 aa23.06■■□□□ 1.28
YBX1-202ENST00000332220 K7ENM7 598 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 ARHGEF15O94989 841 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 ZNF202O95125 648 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 GATMP50440 423 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 AMPD3Q01432 767 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 RAB30Q15771 203 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 CNNM4Q6P4Q7 775 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 ZNF598Q86UK7 904 aaKnown RBP23.05■■□□□ 1.28
YBX1-202ENST00000332220 FAM178BQ8IXR5 827 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 FMR1NBQ8N0W7 255 aaPredicted RBP23.05■■□□□ 1.28
YBX1-202ENST00000332220 PAGE5Q96GU1 130 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 RAD9AQ99638 391 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 EIF2AQ9BY44 585 aaKnown RBP23.05■■□□□ 1.28
YBX1-202ENST00000332220 NKX2-4Q9H2Z4 354 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 RC3H2Q9HBD1 1191 aaKnown RBP23.05■■□□□ 1.28
YBX1-202ENST00000332220 RNF19AQ9NV58 838 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 PANK4Q9NVE7 773 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 TMEM161AQ9NX61 479 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 LRFN2Q9ULH4 789 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 PCDHB7Q9Y5E2 793 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 ANK1P16157 1881 aa23.05■■□□□ 1.28
YBX1-202ENST00000332220 A0A1B0GUA9 196 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 DGKIO75912 1065 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 STAG3L1P0CL83 205 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 GAP43P17677 238 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 ASIC1P78348 528 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 NCBP1Q09161 790 aaKnown RBP23.04■■□□□ 1.28
YBX1-202ENST00000332220 CUL4BQ13620 913 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 EEF1DP3Q658K8 133 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 KRBA2Q6ZNG9 492 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 ENGASEQ8NFI3 743 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 CCDC51Q96ER9 411 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 PDZD7Q9H5P4 517 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 ELAC1Q9H777 363 aaKnown RBP23.04■■□□□ 1.28
YBX1-202ENST00000332220 TBC1D7Q9P0N9 293 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 SEL1LQ9UBV2 794 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 MSRAQ9UJ68 235 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 SZT2Q5T011 3432 aa23.04■■□□□ 1.28
YBX1-202ENST00000332220 COL4A4P53420 1690 aaPredicted RBP23.03■■□□□ 1.28
YBX1-202ENST00000332220 CA3P07451 260 aa23.03■■□□□ 1.28
YBX1-202ENST00000332220 FGFR1P11362 822 aa23.03■■□□□ 1.28
YBX1-202ENST00000332220 COASYQ13057 564 aa23.03■■□□□ 1.28
YBX1-202ENST00000332220 SNW1Q13573 536 aaKnown RBP23.03■■□□□ 1.28
YBX1-202ENST00000332220 CLEC17AQ6ZS10 378 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms