RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 CPSF1Q10570 1443 aaKnown RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 CDC37Q16543 378 aaPredicted RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 KIAA1841Q6NSI8 718 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 OR9Q1Q8NGQ5 310 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 PDCD6IPQ8WUM4 868 aaKnown RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 PAWRQ96IZ0 340 aaKnown RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 ZFYVE19Q96K21 471 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 PRMT1Q99873 361 aaKnown RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 BHMT2Q9H2M3 363 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 ALG13Q9NP73 1137 aaKnown RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 MINPP1Q9UNW1 487 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 ASNSP08243 561 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 PDXDC1Q6P996 788 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 RNF135Q8IUD6 432 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 ARHGAP18Q8N392 663 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 DAB1O75553 588 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 SERPINI2O75830 405 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 ZRANB2O95218 330 aaKnown RBP eCLIP15□□□□□ -0.01
FNDC1-202ENST00000329629 CACNB3P54284 484 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 SKOR1P84550 965 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 MXD4Q14582 209 aaPredicted RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 TMEM179Q6ZVK1 233 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 TTC8Q8TAM2 541 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 WBP4O75554 376 aaKnown RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 PRR29P0C7W0 189 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 ABCD1P33897 745 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 CAV1Q03135 178 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 GPS1Q13098 491 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 VPS72Q15906 364 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 SARM1Q6SZW1 724 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 PODNQ7Z5L7 613 aa15□□□□□ -0.01
FNDC1-202ENST00000329629 APOBEC3FQ8IUX4 373 aaKnown RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
FNDC1-202ENST00000329629 PJA2O43164 708 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 IFNAR1P17181 557 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 ALDH18A1P54886 795 aaKnown RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 USP6NLQ92738 828 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 MOSPD1Q9UJG1 213 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 LGALS16A8MUM7 142 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 ARMC2Q8NEN0 867 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 ZNF564Q8TBZ8 553 aaPredicted RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 OSBPL3Q9H4L5 887 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 AURKCQ9UQB9 309 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 PLEKHG2Q9H7P9 1386 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 CFAP73A6NFT4 308 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 VCAM1P19320 739 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 SURF1Q15526 300 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 RARS2Q5T160 578 aaKnown RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 GANCQ8TET4 914 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 GJB4Q9NTQ9 266 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 LOC102724159A0A0B4J2E5 919 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 MIF4GDA9UHW6 222 aaKnown RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 MRPL28Q13084 256 aaKnown RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 PWP2Q15269 919 aaKnown RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 DDIASQ8IXT1 998 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 ULK4Q96C45 1275 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 ADNPQ9H2P0 1102 aa14.99□□□□□ -0.01
FNDC1-202ENST00000329629 TDRD3Q9H7E2 651 aaKnown RBP14.99□□□□□ -0.01
FNDC1-202ENST00000329629 GH2P01242 217 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 FGFR4P22455 802 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 ASNSD1Q9NWL6 643 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 NCAPHQ15003 741 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 PDXDC2PQ6P474 469 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 ZNF507Q8TCN5 953 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 WRNIP1Q96S55 665 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 SH3GL3Q99963 347 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 ASCC2Q9H1I8 757 aaPredicted RBP14.98□□□□□ -0.01
FNDC1-202ENST00000329629 TAF1DQ9H5J8 278 aaPredicted RBP14.98□□□□□ -0.01
FNDC1-202ENST00000329629 EHD2Q9NZN4 543 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 GCLMP48507 274 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 CCDC144BQ3MJ40 725 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 CEP55Q53EZ4 464 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 DTX3LQ8TDB6 740 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 MTBPQ96DY7 904 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 CD209Q9NNX6 404 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 PCSK1NQ9UHG2 260 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 ENO1P06733 434 aaKnown RBP14.98□□□□□ -0.01
FNDC1-202ENST00000329629 SMARCA1P28370 1054 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 THNSL1Q8IYQ7 743 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 OTULINQ96BN8 352 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 SNF8Q96H20 258 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 C11orf70Q9BRQ4 267 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 ASPSCR1Q9BZE9 553 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 CDV3Q9UKY7 258 aaKnown RBP14.98□□□□□ -0.01
FNDC1-202ENST00000329629 PTCH1Q13635 1447 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 RNF17Q9BXT8 1623 aaKnown RBP14.98□□□□□ -0.01
FNDC1-202ENST00000329629 SPHKAPQ2M3C7 1700 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 K7ERI5 159 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 MYL3P08590 195 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 SSTR3P32745 418 aaPredicted RBP14.98□□□□□ -0.01
FNDC1-202ENST00000329629 PRCPP42785 496 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 AP1B1Q10567 949 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 BTNL9Q6UXG8 535 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 UNC13DQ70J99 1090 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 TMCO5AQ8N6Q1 288 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 B4GALNT2Q8NHY0 566 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 ATXN7L3BQ96GX2 97 aa14.98□□□□□ -0.01
FNDC1-202ENST00000329629 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms