RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 CLSTN1O94985 981 aa23.2■■□□□ 1.3
LIMS2-201ENST00000324938 SMTNP53814 917 aa23.2■■□□□ 1.3
LIMS2-201ENST00000324938 PPATQ06203 517 aa23.2■■□□□ 1.3
LIMS2-201ENST00000324938 DMP1Q13316 513 aaPredicted RBP23.2■■□□□ 1.3
LIMS2-201ENST00000324938 OSGEPQ9NPF4 335 aa23.2■■□□□ 1.3
LIMS2-201ENST00000324938 NOC2LQ9Y3T9 749 aaKnown RBP23.2■■□□□ 1.3
LIMS2-201ENST00000324938 ZSCAN5CA6NGD5 496 aaPredicted RBP23.19■■□□□ 1.3
LIMS2-201ENST00000324938 RAD51CO43502 376 aa23.19■■□□□ 1.3
LIMS2-201ENST00000324938 KCNA2P16389 499 aa23.19■■□□□ 1.3
LIMS2-201ENST00000324938 NPTX2P47972 431 aa23.19■■□□□ 1.3
LIMS2-201ENST00000324938 CARSP49589 748 aaKnown RBP23.19■■□□□ 1.3
LIMS2-201ENST00000324938 HMGCS2P54868 508 aa23.19■■□□□ 1.3
LIMS2-201ENST00000324938 PTPROQ16827 1216 aa23.19■■□□□ 1.3
LIMS2-201ENST00000324938 TRMT1LQ7Z2T5 733 aaKnown RBP23.19■■□□□ 1.3
LIMS2-201ENST00000324938 NSUN6Q8TEA1 469 aaKnown RBP23.19■■□□□ 1.3
LIMS2-201ENST00000324938 TMEM117Q9H0C3 514 aa23.19■■□□□ 1.3
LIMS2-201ENST00000324938 AMFRQ9UKV5 643 aa23.19■■□□□ 1.3
LIMS2-201ENST00000324938 ZNFX1Q9P2E3 1918 aaKnown RBP23.19■■□□□ 1.3
LIMS2-201ENST00000324938 ANKRD62A6NC57 917 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 C19orf81C9J6K1 198 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 BUB1BO60566 1050 aaPredicted RBP23.18■■□□□ 1.3
LIMS2-201ENST00000324938 OTUD6AQ7L8S5 288 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 PALB2Q86YC2 1186 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 APOBEC3FQ8IUX4 373 aaKnown RBP23.18■■□□□ 1.3
LIMS2-201ENST00000324938 TSEN2Q8NCE0 465 aaKnown RBP23.18■■□□□ 1.3
LIMS2-201ENST00000324938 AFAP1L1Q8TED9 768 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 SPIRE2Q8WWL2 714 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 KIFAP3Q92845 792 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 C17orf75Q9HAS0 396 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 BCS1LQ9Y276 419 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 CCDC169A6NNP5 214 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 ATP2A1O14983 1001 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 DKC1O60832 514 aaKnown RBP eCLIP23.18■■□□□ 1.3
LIMS2-201ENST00000324938 ABCB4P21439 1286 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 ADSSP30520 456 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 SNRNP35Q16560 246 aaKnown RBP23.18■■□□□ 1.3
LIMS2-201ENST00000324938 ALS2CLQ60I27 953 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 KLHL7Q8IXQ5 586 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 GOLGA6L1Q8N7Z2 621 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 CASKIN2Q8WXE0 1202 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 ATP6V0A1Q93050 837 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 SH3GL2Q99962 352 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 SEPT11Q9NVA2 429 aaKnown RBP23.18■■□□□ 1.3
LIMS2-201ENST00000324938 TAS2R14Q9NYV8 317 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 GABBR1Q9UBS5 961 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 NFU1Q9UMS0 254 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 NFASCO94856 1347 aa23.18■■□□□ 1.3
LIMS2-201ENST00000324938 ESYT3A0FGR9 886 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 ANKRD63C9JTQ0 380 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 CCDC188H7C350 402 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 ZNF862O60290 1169 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 STBD1O95210 358 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 SLC20A1Q8WUM9 679 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 ARHGEF26Q96DR7 871 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 NTPCRQ9BSD7 190 aaKnown RBP23.17■■□□□ 1.3
LIMS2-201ENST00000324938 MTFR1LQ9H019 292 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 KMT5AQ9NQR1 393 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 DENND3A2RUS2 1198 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 GOLGA8IPA6NC78 632 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 GOLGA8JA6NMD2 632 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 RGS20O76081 388 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 TMEM132BQ14DG7 1078 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 ANGEL2Q5VTE6 544 aaKnown RBP23.17■■□□□ 1.3
LIMS2-201ENST00000324938 CBWD2Q8IUF1 395 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 BSNDQ8WZ55 320 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 KIFC3Q9BVG8 833 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 THAP2Q9H0W7 228 aa23.17■■□□□ 1.3
LIMS2-201ENST00000324938 CNGA1P29973 690 aa23.16■■□□□ 1.3
LIMS2-201ENST00000324938 HADHBP55084 474 aaKnown RBP23.16■■□□□ 1.3
LIMS2-201ENST00000324938 MREGQ8N565 214 aa23.16■■□□□ 1.3
LIMS2-201ENST00000324938 EIF1ADQ8N9N8 165 aaKnown RBP23.16■■□□□ 1.3
LIMS2-201ENST00000324938 CEP170P1Q96L14 293 aa23.16■■□□□ 1.3
LIMS2-201ENST00000324938 TTC7AQ9ULT0 858 aaPredicted RBP23.16■■□□□ 1.3
LIMS2-201ENST00000324938 PSAPP07602 524 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 CAPN2P17655 700 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 TAF3Q5VWG9 929 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 IFT81Q8WYA0 676 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.15■■□□□ 1.37e-7■■■■■ 58.9
LIMS2-201ENST00000324938 CDHR1Q96JP9 859 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 TEX13BQ9BXU2 312 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 MAF1Q9H063 256 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 ISCUQ9H1K1 167 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 CYP39A1Q9NYL5 469 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 CALCOCO1Q9P1Z2 691 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 PPP1R1BQ9UD71 204 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-201ENST00000324938 ZNF541Q9H0D2 1346 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 STAM2O75886 525 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 TCEAL1Q15170 157 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 PRAMEF18Q5VWM3 479 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 CATSPERGQ6ZRH7 1159 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 RHOT2Q8IXI1 618 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 WHAMMQ8TF30 809 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 FBXL18Q96ME1 805 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 PLEKHA4Q9H4M7 779 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 ACAD9Q9H845 621 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 JPH1Q9HDC5 661 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-201ENST00000324938 FZD1Q9UP38 647 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 DIS3Q9Y2L1 958 aaKnown RBP23.15■■□□□ 1.3
LIMS2-201ENST00000324938 PFASO15067 1338 aa23.15■■□□□ 1.3
LIMS2-201ENST00000324938 BHMG1C9JSJ3 638 aaPredicted RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms