RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 CEP72Q9P209 647 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 C17orf102A2RUQ5 167 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 GPR182O15218 404 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 HIP1RO75146 1068 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 TDP2O95551 362 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 MYBL1P10243 752 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 RASA1P20936 1047 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 PNPLA4P41247 253 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 INTS5Q6P9B9 1019 aaKnown RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 CAPN12Q6ZSI9 719 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 TAB3Q8N5C8 712 aaPredicted RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.57□□□□□ -0.88
CD28-201ENST00000324106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.57□□□□□ -0.88
CD28-201ENST00000324106 VCX3AQ9NNX9 186 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 MAGED2Q9UNF1 606 aaPredicted RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 IFNA8P32881 189 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 EIF4A3P38919 411 aaKnown RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 SLC26A2P50443 739 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 SNRPFP62306 86 aaKnown RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 SLMAPQ14BN4 828 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 TMEM132DQ14C87 1099 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 TAF1BQ53T94 588 aaPredicted RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 GRAMD1CQ8IYS0 662 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 SOCS4Q8WXH5 440 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 ALDH8A1Q9H2A2 487 aaPredicted RBP9.57□□□□□ -0.88
CD28-201ENST00000324106 WDR35Q9P2L0 1181 aa9.57□□□□□ -0.88
CD28-201ENST00000324106 CDC25BP30305 580 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ALDH1A3P47895 512 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 SV2CQ496J9 727 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 TCP11X2Q5H9J9 407 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 PHLDB2Q86SQ0 1253 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 SDCCAG3Q96C92 435 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 HVCN1Q96D96 273 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 SLITRK1Q96PX8 696 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 MXRA8Q9BRK3 442 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 MOV10L1Q9BXT6 1211 aaKnown RBP9.56□□□□□ -0.88
CD28-201ENST00000324106 ZNF212Q9UDV6 495 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 SLC13A4Q9UKG4 626 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 TMEM247A6NEH6 219 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 PDXKO00764 312 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 PDHBP11177 359 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 GNA15P30679 374 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 GRIK1P39086 918 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ZNF235Q14590 738 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 PDCD6IPQ8WUM4 868 aaKnown RBP9.56□□□□□ -0.88
CD28-201ENST00000324106 ZNF512Q96ME7 567 aaPredicted RBP9.56□□□□□ -0.88
CD28-201ENST00000324106 CCSER1Q9C0I3 900 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 C17orf75Q9HAS0 396 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ANAPC7Q9UJX3 599 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 FAM170AA1A519 330 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ICAM1P05362 532 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 GUCY2FP51841 1108 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 GPC5P78333 572 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 AMPD2Q01433 879 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 KCNH2Q12809 1159 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 PTPROQ16827 1216 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 LRRC8CQ8TDW0 803 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 TRIM54Q9BYV2 358 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
CD28-201ENST00000324106 COBLO75128 1261 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 DBN1Q16643 649 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 MMEL1Q495T6 779 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ZNF484Q5JVG2 852 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ZNF746Q6NUN9 644 aaPredicted RBP9.56□□□□□ -0.88
CD28-201ENST00000324106 FAM117BQ6P1L5 589 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 CENPUQ71F23 418 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 EHD4Q9H223 541 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 STARD7Q9NQZ5 370 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 ADAMTS1Q9UHI8 967 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 AGAP1Q9UPQ3 857 aa9.56□□□□□ -0.88
CD28-201ENST00000324106 POC1B-GALNT4F8VUJ3 575 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 CCDC188H7C350 402 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 ARHGAP25P42331 645 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 ATP2C1P98194 919 aaPredicted RBP9.55□□□□□ -0.88
CD28-201ENST00000324106 IL9RQ01113 521 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 PRKCEQ02156 737 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 NR1H3Q13133 447 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 EMC2Q15006 297 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 WDR72Q3MJ13 1102 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 MORC4Q8TE76 937 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 MED15Q96RN5 788 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 ZWILCHQ9H900 591 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 CDC23Q9UJX2 597 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 DDX5P17844 614 aaKnown RBP9.55□□□□□ -0.88
CD28-201ENST00000324106 TAC1P20366 129 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 CDC27P30260 824 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 ELAVL2Q12926 359 aaKnown RBP9.55□□□□□ -0.88
CD28-201ENST00000324106 TOB2Q14106 344 aaPredicted RBP9.55□□□□□ -0.88
CD28-201ENST00000324106 SPOPLQ6IQ16 392 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 STAG2Q8N3U4 1231 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 ZC3H15Q8WU90 426 aaKnown RBP9.55□□□□□ -0.88
CD28-201ENST00000324106 HSPH1Q92598 858 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 IP6K2Q9UHH9 426 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 PTPN22Q9Y2R2 807 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 SH3BP1Q9Y3L3 701 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 AP3B1O00203 1094 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 TMCC1O94876 653 aa9.55□□□□□ -0.88
CD28-201ENST00000324106 MT-ND3P03897 115 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms