RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 RBM12Q9NTZ6 932 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 GIMAP4Q9NUV9 329 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ARHGAP20Q9P2F6 1191 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 MCM8Q9UJA3 840 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 MAGED2Q9UNF1 606 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 HPSEQ9Y251 543 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 HIVEP2P31629 2446 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PCDH11XQ9BZA7 1347 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PCDH11YQ9BZA8 1340 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 HCRTO43612 131 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PRPF6O94906 941 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 MLH1P40692 756 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RCAN1P53805 252 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RCN1Q15293 331 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PPP6R3Q5H9R7 873 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 COL23A1Q86Y22 540 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 PIGOQ8TEQ8 1089 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 HOOK2Q96ED9 719 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SETDB2Q96T68 719 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 OSGEPQ9NPF4 335 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 FBXO28Q9NVF7 368 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SEL1LQ9UBV2 794 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 GPR179Q6PRD1 2367 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 KDM1AO60341 852 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 DDHD2O94830 711 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ECEL1O95672 775 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 HDCP19113 662 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 IGHMBP2P38935 993 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 SNX1Q13596 522 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PEX6Q13608 980 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SND1Q7KZF4 910 aaKnown RBP eCLIP3.88□□□□□ -1.79
GEN1-201ENST00000317402 KIF2BQ8N4N8 673 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SH3GL1Q99961 368 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 METTL14Q9HCE5 456 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 AFF2P51816 1311 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SUPT3HO75486 399 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 HIBADHP31937 336 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 MYO1EQ12965 1108 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 BCAS4Q8TDM0 211 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 TCP11Q8WWU5 503 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SH3GL2Q99962 352 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SIKE1Q9BRV8 207 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 MMTAG2Q9BU76 263 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 SH2D4AQ9H788 454 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ZNF395Q9H8N7 513 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 ANO10Q9NW15 660 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 ANKHD1Q8IWZ3 2542 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 MYOCOSA0A1B0GUC4 107 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 WDR46O15213 610 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 SPAG1Q07617 926 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 IFT88Q13099 833 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ACAP1Q15027 740 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 OLFML2BQ68BL8 750 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ATP2A3Q93084 1043 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 NR1H4Q96RI1 486 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 EDEM3Q9BZQ6 932 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 NACA2Q9H009 215 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 COPRSQ9NQ92 184 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CACNG4Q9UBN1 327 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ADAM21Q9UKJ8 722 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PHF20L1A8MW92 1017 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 IL15P40933 162 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 PAFAH1B1P43034 410 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 TUBP50607 506 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RASSF2P50749 326 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 POLR2FP61218 127 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 FOXD4Q12950 439 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 FAM228AQ86W67 206 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PARP9Q8IXQ6 854 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 GPR161Q8N6U8 529 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 KIAA0895Q8NCT3 520 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ST13P5Q8NFI4 369 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 MMADHCQ9H3L0 296 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 NHSL1Q5SYE7 1610 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SPATA31A1Q5TZJ5 1347 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RFXAPO00287 272 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PDHA1P08559 390 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 KCNJ1P48048 391 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CCDC15Q0P6D6 951 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CTTNQ14247 550 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 RABL6Q3YEC7 729 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 FAM133BQ5BKY9 247 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 MAP3K21Q5TCX8 1036 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RCSD1Q6JBY9 416 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CADPS2Q86UW7 1296 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ATP6V1E2Q96A05 226 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ARHGEF26Q96DR7 871 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RNPC3Q96LT9 517 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 HEMK1Q9Y5R4 338 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 BZW2Q9Y6E2 419 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 SCINQ9Y6U3 715 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 NLRC5Q86WI3 1866 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ELP1O95163 1332 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 MAN1A2O60476 641 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TMCC1O94876 653 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 TOP3BO95985 862 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 GJB1P08034 283 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 HSPA8P11142 646 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms