RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.66□□□□□ -0.86
CTC1-201ENST00000315684 ARP10275 920 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 RESTQ13127 1097 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 MUC3BQ9H195 1237 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 ARFGAP3Q9NP61 516 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 NKIRAS1Q9NYS0 192 aa9.66□□□□□ -0.86
CTC1-201ENST00000315684 MAP3K13O43283 966 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 TPD52P55327 224 aaPredicted RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 PSMC6P62333 389 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 SDE2Q6IQ49 451 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 NOTUMQ6P988 496 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 C11orf57Q6ZUT1 292 aaPredicted RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 GSDMAQ96QA5 445 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 C11orf70Q9BRQ4 267 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 DNAJC17Q9NVM6 304 aaKnown RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 RRN3P2A6NIE6 340 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 MCF2LO15068 1137 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 MAGEB2O15479 319 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 FTCDO95954 541 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 THOC5Q13769 683 aaKnown RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 INTS8Q75QN2 995 aaKnown RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 RNF217Q8TC41 542 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 SOCS4Q8WXH5 440 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 COPS5Q92905 334 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 HDAC11Q96DB2 347 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 ZNF560Q96MR9 790 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 CARD6Q9BX69 1037 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 PXMP2Q9NR77 195 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 AKR1A1P14550 325 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 DSG3P32926 999 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 ALCAMQ13740 583 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 RPS6KA2Q15349 733 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 CFAP221Q4G0U5 840 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 TREML2Q5T2D2 321 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 SYCP2LQ5T4T6 812 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 ZNF513Q8N8E2 541 aaPredicted RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 EMSYQ7Z589 1322 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 TTLL13PA6NNM8 815 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 SUPT20HL2P0C7V6 817 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 KNOP1Q1ED39 458 aaKnown RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 UNC13DQ70J99 1090 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 IGDCC4Q8TDY8 1250 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 DPF2Q92785 391 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 CAMKK2Q96RR4 588 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 HEMGNQ9BXL5 484 aa9.65□□□□□ -0.86
CTC1-201ENST00000315684 TIMM13Q9Y5L4 95 aaPredicted RBP9.65□□□□□ -0.86
CTC1-201ENST00000315684 CAMTA1Q9Y6Y1 1673 aa9.65□□□□□ -0.87
CTC1-201ENST00000315684 POC1B-GALNT4F8VUJ3 575 aa9.65□□□□□ -0.87
CTC1-201ENST00000315684 PI4K2BG5E9Z4 385 aa9.65□□□□□ -0.87
CTC1-201ENST00000315684 PTPRAP18433 802 aa9.65□□□□□ -0.87
CTC1-201ENST00000315684 FLT3LGP49771 235 aa9.65□□□□□ -0.87
CTC1-201ENST00000315684 PPATQ06203 517 aa9.65□□□□□ -0.87
CTC1-201ENST00000315684 AP1B1Q10567 949 aa9.65□□□□□ -0.87
CTC1-201ENST00000315684 POLR1AO95602 1720 aaPredicted RBP9.65□□□□□ -0.87
CTC1-201ENST00000315684 CEMIPQ8WUJ3 1361 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 CXCL11O14625 94 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 ATF2P15336 505 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 AKAP5P24588 427 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 CASP2P42575 452 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 PSMC1P62191 440 aaKnown RBP9.64□□□□□ -0.87
CTC1-201ENST00000315684 MFSD10Q14728 455 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 FAM102AQ5T9C2 384 aaPredicted RBP9.64□□□□□ -0.87
CTC1-201ENST00000315684 APOBEC3HQ6NTF7 200 aaKnown RBP9.64□□□□□ -0.87
CTC1-201ENST00000315684 PRR23CQ6ZRP0 262 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 UBA3Q8TBC4 463 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 PGLYRP2Q96PD5 576 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 ADAM22Q9P0K1 906 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 LSM7Q9UK45 103 aaKnown RBP9.64□□□□□ -0.87
CTC1-201ENST00000315684 MOCS3O95396 460 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 APOEP02649 317 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 URODP06132 367 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 SYN1P17600 705 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
CTC1-201ENST00000315684 PRCPP42785 496 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 ARHGAP15Q53QZ3 475 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 CCDC85BQ15834 202 aaPredicted RBP9.64□□□□□ -0.87
CTC1-201ENST00000315684 GPT2Q8TD30 523 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 WNK4Q96J92 1243 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 SMC6Q96SB8 1091 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 PI4K2AQ9BTU6 479 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 COLEC11Q9BWP8 271 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 USP20Q9Y2K6 914 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 TAF6LQ9Y6J9 622 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 VWA5AO00534 786 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 SULT1E1P49888 294 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 EFNA5P52803 228 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 EVCP57679 992 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 C10orf120Q5SQS8 335 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 C6orf163Q5TEZ5 329 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 NFRKBQ6P4R8 1299 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 SZRD1Q7Z422 152 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 TARS2Q9BW92 718 aaKnown RBP9.64□□□□□ -0.87
CTC1-201ENST00000315684 SPZ1Q9BXG8 430 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 CYP4A22Q5TCH4 519 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 HHATQ5VTY9 493 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 NEK9Q8TD19 979 aa9.64□□□□□ -0.87
CTC1-201ENST00000315684 PRPF31Q8WWY3 499 aaKnown RBP9.64□□□□□ -0.87
CTC1-201ENST00000315684 REEP2Q9BRK0 252 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms