RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TBC1D23Q9NUY8 699 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 DDX56Q9NY93 547 aaKnown RBP14.52□□□□□ -0.09
CLCN6-201ENST00000312413 WDR19Q8NEZ3 1342 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 MAGI2Q86UL8 1455 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 CLRN2A0PK11 232 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 CHN1P15882 459 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 CDK8P49336 464 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 KRT17Q04695 432 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 RASGRF1Q13972 1273 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 THNSL1Q8IYQ7 743 aa14.52□□□□□ -0.09
CLCN6-201ENST00000312413 INTS2Q9H0H0 1204 aaKnown RBP14.52□□□□□ -0.09
CLCN6-201ENST00000312413 KRT8P05787 483 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 SDC4P31431 198 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 ROR1Q01973 937 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 LONP2Q86WA8 852 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 NDUFAF2Q8N183 169 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 PBXIP1Q96AQ6 731 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 MTRQ99707 1265 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 ZSCAN20P17040 1043 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-201ENST00000312413 MECOMQ03112 1051 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 TRIM60Q495X7 471 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 E4F1Q66K89 784 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-201ENST00000312413 ZNF746Q6NUN9 644 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-201ENST00000312413 GLYCTKQ8IVS8 523 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 NR1H4Q96RI1 486 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-201ENST00000312413 SLC9A2Q9UBY0 812 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 PCSK1NQ9UHG2 260 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 SPATA31E1Q6ZUB1 1445 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 ENO1P06733 434 aaKnown RBP14.51□□□□□ -0.09
CLCN6-201ENST00000312413 EIF2AK2P19525 551 aaKnown RBP14.51□□□□□ -0.09
CLCN6-201ENST00000312413 BCAR1P56945 870 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 MCPH1Q8NEM0 835 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 LZICQ8WZA0 190 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 PITPNM2Q9BZ72 1349 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 SEC24DO94855 1032 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-201ENST00000312413 TMCC1O94876 653 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 JAK3P52333 1124 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 RCAN1P53805 252 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 NBPF20Q3BBV1 942 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 TMEM154Q6P9G4 183 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 CNKSR1Q969H4 720 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 NLRP4Q96MN2 994 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 AURKCQ9UQB9 309 aa14.51□□□□□ -0.09
CLCN6-201ENST00000312413 TBXAS1P24557 533 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 NFKBIAP25963 317 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CIITAP33076 1130 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 VAMP7P51809 220 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 MAP3K7CLP57077 242 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ORC2Q13416 577 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ZNF699Q32M78 642 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 KIAA1755Q5JYT7 1200 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CDKL3Q8IVW4 592 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 OXER1Q8TDS5 423 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 RANBP17Q9H2T7 1088 aaKnown RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CLDN3O15551 220 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ESRRBO95718 433 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ALDH18A1P54886 795 aaKnown RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 HIF1AQ16665 826 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CCNI2Q6ZMN8 369 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 SZRD1Q7Z422 152 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ZNF212Q9UDV6 495 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 IGSF1Q8N6C5 1336 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CDH16O75309 829 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ARPP19P56211 112 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 INPP5AQ14642 412 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 DSTYKQ6XUX3 929 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 DNAJC9Q8WXX5 260 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ANKRD7Q92527 254 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 PSD3Q9NYI0 1048 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 PHF20L1A8MW92 1017 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CRKLP46109 303 aaKnown RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 TBCCQ15814 346 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 TXNRD1Q16881 649 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 Q3C1V9 767 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 PADI6Q6TGC4 694 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 SULF1Q8IWU6 871 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 SEC16BQ96JE7 1060 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 XPO6Q96QU8 1125 aaKnown RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 IRX2Q9BZI1 471 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ZDHHC9Q9Y397 364 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ATP7AQ04656 1500 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 LOC102724428A0A0B4J2F2 783 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CARSP49589 748 aaKnown RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ARSEP51690 589 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 SIK1P57059 783 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 SKOR1P84550 965 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CCZ1BP86790 482 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 CCZ1P86791 482 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 FASTKD1Q53R41 847 aaKnown RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 TBC1D10CQ8IV04 446 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ATL2Q8NHH9 583 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 AP5M1Q9H0R1 490 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ADNPQ9H2P0 1102 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 KCNF1Q9H3M0 494 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ALG13Q9NP73 1137 aaKnown RBP14.5□□□□□ -0.09
CLCN6-201ENST00000312413 ZBTB1Q9Y2K1 713 aa14.5□□□□□ -0.09
CLCN6-201ENST00000312413 LBRQ14739 615 aaKnown RBP14.49□□□□□ -0.09
CLCN6-201ENST00000312413 TRIM72Q6ZMU5 477 aa14.49□□□□□ -0.09
CLCN6-201ENST00000312413 TMC4Q7Z404 712 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms