RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PPP4R3CPQ6ZMV5 832 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 SLC17A8Q8NDX2 589 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 MYLIPQ8WY64 445 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 CUEDC2Q9H467 287 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 PARVGQ9HBI0 331 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 UBN1Q9NPG3 1134 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 STXBP5LQ9Y2K9 1186 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 PCDHB2Q9Y5E7 798 aa21.86■■□□□ 1.09
VEGFB-201ENST00000309422 CNTNAP2Q9UHC6 1331 aa21.85■■□□□ 1.09
VEGFB-201ENST00000309422 CARNS1A5YM72 827 aa21.85■■□□□ 1.09
VEGFB-201ENST00000309422 FAM189BP81408 668 aa21.85■■□□□ 1.09
VEGFB-201ENST00000309422 SLC27A1Q6PCB7 646 aa21.85■■□□□ 1.09
VEGFB-201ENST00000309422 BSNDQ8WZ55 320 aa21.85■■□□□ 1.09
VEGFB-201ENST00000309422 GUCD1Q96NT3 240 aa21.85■■□□□ 1.09
VEGFB-201ENST00000309422 C11orf84Q9BUA3 381 aaPredicted RBP21.85■■□□□ 1.09
VEGFB-201ENST00000309422 FGFR1P11362 822 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 NPTX2P47972 431 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 AMPD3Q01432 767 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 PTPROQ16827 1216 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 FAM187BQ17R55 369 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 CSPP1Q1MSJ5 1256 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 TMEM192Q8IY95 271 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 PDILTQ8N807 584 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 IQUBQ8NA54 791 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 ZNF689Q96CS4 500 aaPredicted RBP21.84■■□□□ 1.09
VEGFB-201ENST00000309422 CPB2Q96IY4 423 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 REEP2Q9BRK0 252 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 KIFC3Q9BVG8 833 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 PCDHB12Q9Y5F1 795 aa21.84■■□□□ 1.09
VEGFB-201ENST00000309422 ACKR2O00590 384 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 RB1P06400 928 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 ITGA4P13612 1032 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 ARF4P18085 180 aaPredicted RBP21.83■■□□□ 1.08
VEGFB-201ENST00000309422 LAG3P18627 525 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 USP49Q70CQ1 688 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 MYCT1Q8N699 235 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 SPIRE2Q8WWL2 714 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 BICD1Q96G01 975 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 PLVAPQ9BX97 442 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 MRPL4Q9BYD3 311 aaKnown RBP21.83■■□□□ 1.08
VEGFB-201ENST00000309422 MAGEF1Q9HAY2 307 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 RC3H2Q9HBD1 1191 aaKnown RBP21.83■■□□□ 1.08
VEGFB-201ENST00000309422 BLOC1S4Q9NUP1 217 aa21.83■■□□□ 1.08
VEGFB-201ENST00000309422 LAMA2P24043 3122 aaKnown RBP21.82■■□□□ 1.08
VEGFB-201ENST00000309422 K7ENM7 598 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 ZNF623O75123 536 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 CACNB1Q02641 598 aaPredicted RBP21.82■■□□□ 1.08
VEGFB-201ENST00000309422 RNASELQ05823 741 aaKnown RBP21.82■■□□□ 1.08
VEGFB-201ENST00000309422 DCAF4L1Q3SXM0 396 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 EPC2Q52LR7 807 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 FAM178BQ8IXR5 827 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 HELQQ8TDG4 1101 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 C17orf80Q9BSJ5 609 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 FZD8Q9H461 694 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 TMEM134Q9H6X4 195 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 RSAD1Q9HA92 442 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 POLD4Q9HCU8 107 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 RCOR1Q9UKL0 485 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 INPP5FQ9Y2H2 1132 aa21.82■■□□□ 1.08
VEGFB-201ENST00000309422 MRPL42Q9Y6G3 142 aaKnown RBP21.82■■□□□ 1.08
VEGFB-201ENST00000309422 GOLGA6L4A6NEF3 574 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 CEP57L1Q8IYX8 460 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 DHX58Q96C10 678 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 CCDC34Q96HJ3 373 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 FAM193BQ96PV7 902 aaPredicted RBP21.81■■□□□ 1.08
VEGFB-201ENST00000309422 PANK2Q9BZ23 570 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 TNMDQ9H2S6 317 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 CIZ1Q9ULV3 898 aaPredicted RBP21.81■■□□□ 1.08
VEGFB-201ENST00000309422 PCDHA7Q9UN72 937 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 MYH15Q9Y2K3 1946 aa21.81■■□□□ 1.08
VEGFB-201ENST00000309422 A0A1B0GUA9 196 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 SFI1A8K8P3 1242 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 RBAK-RBAKDNI3L0D1 243 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 SLC16A4O15374 487 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 B4GALT5O43286 388 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 SLC34A2O95436 690 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 NPTXRO95502 500 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 HOXA11P31270 313 aaPredicted RBP21.8■■□□□ 1.08
VEGFB-201ENST00000309422 PPM1AP35813 382 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 BMPR1AP36894 532 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 GATMP50440 423 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 AMHR2Q16671 573 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 NAALADL2Q58DX5 795 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 ATF7IP2Q5U623 682 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 ZNF598Q86UK7 904 aaKnown RBP21.8■■□□□ 1.08
VEGFB-201ENST00000309422 DAW1Q8N136 415 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 CRIPAKQ8N1N5 446 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 MICALL1Q8N3F8 863 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 GDPD5Q8WTR4 605 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 LEO1Q8WVC0 666 aaPredicted RBP21.8■■□□□ 1.08
VEGFB-201ENST00000309422 CLP1Q92989 425 aaKnown RBP21.8■■□□□ 1.08
VEGFB-201ENST00000309422 RPS6KC1Q96S38 1066 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 APOL6Q9BWW8 343 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 CCDC113Q9H0I3 377 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 ARHGAP28Q9P2N2 729 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 KANSL3Q9P2N6 904 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 IPPQ9Y573 584 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 GBF1Q92538 1859 aa21.8■■□□□ 1.08
VEGFB-201ENST00000309422 NPHP3-ACAD11A0A0J9YXS1 232 aa21.79■■□□□ 1.08
VEGFB-201ENST00000309422 ARHGEF15O94989 841 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms