RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 COA1Q9GZY4 146 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 MIS12Q9H081 205 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 ATP9AO75110 1047 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 PEX14O75381 377 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 ZNF24P17028 368 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 STX2P32856 288 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 BTDP43251 543 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 DENND2CQ68D51 928 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 FGFBP2Q9BYJ0 223 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 CCSER1Q9C0I3 900 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 PALMDQ9NP74 551 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 SEC63Q9UGP8 760 aaKnown RBP11.22□□□□□ -0.61
MSRB3-201ENST00000308259 ZBTB21Q9ULJ3 1066 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 SFI1A8K8P3 1242 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 SPECC1L-ADORA2AF8WAN1 911 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 P4HA2O15460 535 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 FTCDO95954 541 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 KRT16P08779 473 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 GSTA2P09210 222 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 CDK8P49336 464 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 COPS2P61201 443 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 MEA1Q16626 185 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 SBK1Q52WX2 424 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 MIER3Q7Z3K6 550 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 APLFQ8IW19 511 aaPredicted RBP11.22□□□□□ -0.61
MSRB3-201ENST00000308259 DHTKD1Q96HY7 919 aaPredicted RBP11.22□□□□□ -0.61
MSRB3-201ENST00000308259 NDST4Q9H3R1 872 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 SH2D4AQ9H788 454 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSRB3-201ENST00000308259 GGA2Q9UJY4 613 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 TRIM33Q9UPN9 1127 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 ARAP2Q8WZ64 1704 aa11.22□□□□□ -0.61
MSRB3-201ENST00000308259 NPHP3-ACAD11A0A0J9YXS1 232 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 GFPT2O94808 682 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 EPB41P11171 864 aaKnown RBP11.21□□□□□ -0.61
MSRB3-201ENST00000308259 SLC16A2P36021 539 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 GTF2IP78347 998 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 PDIA5Q14554 519 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 SFMBT2Q5VUG0 894 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 PPP1R14BQ96C90 147 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 DDX18Q9NVP1 670 aaKnown RBP11.21□□□□□ -0.61
MSRB3-201ENST00000308259 FBXL5Q9UKA1 691 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.61
MSRB3-201ENST00000308259 KCNK3O14649 394 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 ADCY3O60266 1144 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 SLC1A4P43007 532 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 ADARP55265 1226 aaKnown RBP11.21□□□□□ -0.61
MSRB3-201ENST00000308259 GRB10Q13322 594 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 KIAA0753Q2KHM9 967 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 MFSD14BQ5SR56 506 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 SV2BQ7L1I2 683 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 DDX42Q86XP3 938 aaKnown RBP eCLIP11.21□□□□□ -0.61
MSRB3-201ENST00000308259 CREG2Q8IUH2 290 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 SP8Q8IXZ3 490 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
MSRB3-201ENST00000308259 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.61
MSRB3-201ENST00000308259 GOLPH3Q9H4A6 298 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 SNX12Q9UMY4 172 aa11.21□□□□□ -0.61
MSRB3-201ENST00000308259 NPTXRO95502 500 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 CALCRLQ16602 461 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 ECM1Q16610 540 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 ANO7Q6IWH7 933 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 STYK1Q6J9G0 422 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.62
MSRB3-201ENST00000308259 NME8Q8N427 588 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 CCT6BQ92526 530 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 STMN4Q9H169 189 aaPredicted RBP11.21□□□□□ -0.62
MSRB3-201ENST00000308259 C6orf50Q9HD87 102 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 TXLNGQ9NUQ3 528 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 BICDL2A1A5D9 508 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 GSTA1P08263 222 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 CDC37Q16543 378 aaPredicted RBP11.21□□□□□ -0.62
MSRB3-201ENST00000308259 VWA3BQ502W6 1294 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 TMCO4Q5TGY1 634 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 SNX29Q8TEQ0 813 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 ZFAND2BQ8WV99 257 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 MPP4Q96JB8 637 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 BLOC1S4Q9NUP1 217 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 TMCO1Q9UM00 188 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 SH3GLB1Q9Y371 365 aa11.21□□□□□ -0.62
MSRB3-201ENST00000308259 DOT1LQ8TEK3 1739 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 LTBP4Q8N2S1 1624 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 MYO3BQ8WXR4 1341 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 ONECUT3O60422 494 aaPredicted RBP11.2□□□□□ -0.62
MSRB3-201ENST00000308259 NFKBIAP25963 317 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 EPS15P42566 896 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 ITGB3BPQ13352 177 aaPredicted RBP11.2□□□□□ -0.62
MSRB3-201ENST00000308259 TRADDQ15628 312 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 CASP10Q92851 521 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 PLVAPQ9BX97 442 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 SH3GLB2Q9NR46 395 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 NKIRAS1Q9NYS0 192 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 GSTTP1A0A1W2PQM5 241 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 KRT13P13646 458 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 PCYT1AP49585 367 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 GNAQP50148 359 aa11.2□□□□□ -0.62
MSRB3-201ENST00000308259 ADAT2Q7Z6V5 191 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms