RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 AADATQ8N5Z0 425 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 APPL2Q8NEU8 664 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 VPS37AQ8NEZ2 397 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 MBIPQ9NS73 344 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 BTBD3Q9Y2F9 522 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 KMT2EQ8IZD2 1858 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 FAM47DPA6NHR8 397 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 CDH3P22223 829 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 MDH1P40925 334 aaKnown RBP5.13□□□□□ -1.59
CSMD3-201ENST00000297405 TRAP1Q12931 704 aaKnown RBP5.13□□□□□ -1.59
CSMD3-201ENST00000297405 RESTQ13127 1097 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 SGO2Q562F6 1265 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 TNFAIP8L3Q5GJ75 292 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 SVOPQ8N4V2 548 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 MAGEE1Q9HCI5 957 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 NDUFA10O95299 355 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 PABPC1P11940 636 aaKnown RBP5.13□□□□□ -1.59
CSMD3-201ENST00000297405 PEX5P50542 639 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 VCPP55072 806 aaKnown RBP5.13□□□□□ -1.59
CSMD3-201ENST00000297405 TTC29Q8NA56 475 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-201ENST00000297405 RHPN1Q8TCX5 695 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 SMCR8Q8TEV9 937 aaPredicted RBP5.13□□□□□ -1.59
CSMD3-201ENST00000297405 SLF1Q9BQI6 1058 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 PICK1Q9NRD5 415 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 ING4Q9UNL4 249 aa5.13□□□□□ -1.59
CSMD3-201ENST00000297405 PDZK1P1A8MUH7 402 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PFKFB2O60825 505 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 VDRP11473 427 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PIK3CBP42338 1070 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ARL4CP56559 192 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 CYB5D1Q6P9G0 228 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 VSTM4Q8IW00 320 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PPP1R36Q96LQ0 422 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ASAP1Q9ULH1 1129 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 CFTRP13569 1480 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 STAM2O75886 525 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 DLGAP3O95886 979 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 OCM2P0CE71 109 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 OCMP0CE72 109 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ATP5JP18859 108 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 EPC2Q52LR7 807 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ARMC4Q5T2S8 1044 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 GGT6Q6P531 493 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ZNF530Q6P9A1 599 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 XKRXQ6PP77 449 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ANKRD42Q8N9B4 389 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 CLHC1Q8NHS4 586 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 SCFD2Q8WU76 684 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 DNM3Q9UQ16 869 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ARHGEF10O15013 1369 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 GSAPA4D1B5 854 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 COPEO14579 308 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 IL1RL1Q01638 556 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ZC3H12BQ5HYM0 836 aaKnown RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 TMTC4Q5T4D3 741 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 KLHL7Q8IXQ5 586 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PYROXD1Q8WU10 500 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 HDAC7Q8WUI4 952 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 SNX19Q92543 992 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ACAP3Q96P50 834 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 BOLA2Q9H3K6 86 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PPARGC1AQ9UBK2 798 aaKnown RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 SCP2P22307 547 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 MARCKSP29966 332 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ADARP55265 1226 aaKnown RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 TRIM72Q6ZMU5 477 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 UNC13DQ70J99 1090 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 RRAGAQ7L523 313 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 CCDC126Q96EE4 140 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 FAM213AQ9BRX8 229 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 NAT9Q9BTE0 207 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 INTS13Q9NVM9 706 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ALBP02768 609 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 GFPT1Q06210 699 aaPredicted RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 DGKKQ5KSL6 1271 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 SYMPKQ92797 1274 aaKnown RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ZBTB10Q96DT7 871 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 UBP1Q9NZI7 540 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PCNX1Q96RV3 2341 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 RGS5O15539 181 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 EXOC3O60645 756 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 FSBPO95073 299 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 CALB2P22676 271 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PTPN12Q05209 780 aaKnown RBP5.12□□□□□ -1.59
CSMD3-201ENST00000297405 STX5Q13190 355 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 IRGCQ6NXR0 463 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 MZT2BQ6NZ67 158 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 STRA8Q7Z7C7 330 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 AMER2Q8N7J2 671 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 AIPL1Q9NZN9 384 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PLEKHG2Q9H7P9 1386 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 ZDBF2Q9HCK1 2354 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 PRXQ9BXM0 1461 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 BTBD18B2RXH4 712 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 IFNB1P01574 187 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 HLA-DPA1P20036 260 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 C16orf72Q14CZ0 275 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 TRIQKQ629K1 86 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 KRT78Q8N1N4 520 aa5.12□□□□□ -1.59
CSMD3-201ENST00000297405 RANBP17Q9H2T7 1088 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms