RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GNPTABQ3T906 1256 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 TAB3Q8N5C8 712 aaPredicted RBP10.07□□□□□ -0.8
PRDM9-201ENST00000296682 CLEC4DQ8WXI8 215 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 ZBTB10Q96DT7 871 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 RIT2Q99578 217 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 THAP2Q9H0W7 228 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 PXMP2Q9NR77 195 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 RNF181Q9P0P0 153 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 DDX3XO00571 662 aaKnown RBP eCLIP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 PLA2G6O60733 806 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 KRT19P08727 400 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 CCDC172P0C7W6 258 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 PTPRAP18433 802 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 SOX5P35711 763 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 SNX1Q13596 522 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 PHLDB3Q6NSJ2 640 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 AADACL2Q6P093 401 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 ARHGEF19Q8IW93 802 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 DAW1Q8N136 415 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 SLC35G2Q8TBE7 412 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 DCPSQ96C86 337 aaKnown RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 GANQ9H2C0 597 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 WDR90Q96KV7 1748 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 ANO9A1A5B4 782 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 GRID2IPA4D2P6 1211 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 ITGA4P13612 1032 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 PTGER2P43116 358 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 NPTX2P47972 431 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 TNNC1P63316 161 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 ITIH3Q06033 890 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 IFFO1Q0D2I5 559 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 NAB2Q15742 525 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 IRF2BP2Q7Z5L9 587 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 TRIM50Q86XT4 487 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 CCDC50Q8IVM0 306 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 SCYL3Q8IZE3 742 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 LMBR1Q8WVP7 490 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 ZBTB45Q96K62 511 aaPredicted RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 DNAJC17Q9NVM6 304 aaKnown RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 GLI1P08151 1106 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 PLS3P13797 630 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 TMEM132BQ14DG7 1078 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 SNRNP35Q16560 246 aaKnown RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 NFIL3Q16649 462 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 ASTE1Q2TB18 679 aaPredicted RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 CCNI2Q6ZMN8 369 aaPredicted RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 IFT20Q8IY31 132 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 LRRC71Q8N4P6 559 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 SH2D3CQ8N5H7 860 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 BBXQ8WY36 941 aaPredicted RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 ATP6V0A1Q93050 837 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 FAM118BQ9BPY3 351 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 KIAA1683Q9H0B3 1180 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 POLR3FQ9H1D9 316 aaPredicted RBP10.06□□□□□ -0.8
PRDM9-201ENST00000296682 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 STIM2Q9P246 746 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 APEX2Q9UBZ4 518 aa10.06□□□□□ -0.8
PRDM9-201ENST00000296682 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 GOLGA6CA6NDK9 693 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 K7ERI5 159 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 MAP2K7O14733 419 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 BUB1BO60566 1050 aaPredicted RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SGPL1O95470 568 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 GOLGA6DP0CG33 693 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 PRKCEQ02156 737 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SPOPLQ6IQ16 392 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 THNSL1Q8IYQ7 743 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 NLRP4Q96MN2 994 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 TEX13BQ9BXU2 312 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 A1CFQ9NQ94 594 aaKnown RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 GOLGA6AQ9NYA3 693 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SLC9A2Q9UBY0 812 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 PGAP2Q9UHJ9 254 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 LRRC37A2A6NM11 1700 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 PHF20L1A8MW92 1017 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 KRT14P02533 472 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 TRIP13Q15645 432 aaPredicted RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SCARA5Q6ZMJ2 495 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 OR2W6PQ8NHA6 318 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 TAS1R2Q8TE23 839 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 RUBCNQ92622 972 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 TATDN2Q93075 761 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 DOCK5Q9H7D0 1870 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 LCTP09848 1927 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 GOLGA6L10A6NI86 522 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 ACTR2P61160 394 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SUPT20HL1Q3ZLR7 823 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 INTS8Q75QN2 995 aaKnown RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 ANO5Q75V66 913 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SLC47A2Q86VL8 602 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 TAX1BP1Q86VP1 789 aa10.05□□□□□ -0.8
PRDM9-201ENST00000296682 CCDC60Q8IWA6 550 aaPredicted RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 SYN2Q92777 582 aaPredicted RBP10.05□□□□□ -0.8
PRDM9-201ENST00000296682 ZNF653Q96CK0 615 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms