RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 FAM105AQ9NUU6 356 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 TPCN1Q9ULQ1 816 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 DUSP12Q9UNI6 340 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
RFC4-201ENST00000296273 NID2Q14112 1375 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 A0A087WZ62 844 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 CHMP2AO43633 222 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 GJB2P29033 226 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 PTPN14Q15678 1187 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 UGCGQ16739 394 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 MTERF2Q49AM1 385 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 CWF19L1Q69YN2 538 aaKnown RBP11.82□□□□□ -0.52
RFC4-201ENST00000296273 ELMSAN1Q6PJG2 1045 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 TMC5Q6UXY8 1006 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 MIER3Q7Z3K6 550 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 FLCNQ8NFG4 579 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 URGCPQ8TCY9 931 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 AUTS2Q8WXX7 1259 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 FDXACB1Q9BRP7 624 aaPredicted RBP11.82□□□□□ -0.52
RFC4-201ENST00000296273 UNC45AQ9H3U1 944 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 IGSF9Q9P2J2 1179 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 KANSL3Q9P2N6 904 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 SEPT9Q9UHD8 586 aaPredicted RBP11.82□□□□□ -0.52
RFC4-201ENST00000296273 DPP7Q9UHL4 492 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 SSX2IPQ9Y2D8 614 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 MYO15AQ9UKN7 3530 aa11.82□□□□□ -0.52
RFC4-201ENST00000296273 ADAMTS3O15072 1205 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 PFKFB2O60825 505 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 MAFO75444 373 aaPredicted RBP11.81□□□□□ -0.52
RFC4-201ENST00000296273 CSDE1O75534 798 aaKnown RBP11.81□□□□□ -0.52
RFC4-201ENST00000296273 OFD1O75665 1012 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 PSMD10O75832 226 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 LETM1O95202 739 aaPredicted RBP11.81□□□□□ -0.52
RFC4-201ENST00000296273 F13A1P00488 732 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 KLRC2P26717 231 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 CLCN4P51793 760 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 ZNF445P59923 1031 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 DRP2Q13474 957 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 PKP1Q13835 747 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
RFC4-201ENST00000296273 LETM2Q2VYF4 491 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 Q4G0T1 1027 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
RFC4-201ENST00000296273 CYP26C1Q6V0L0 522 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 Q6ZUG5 572 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 CATSPER4Q7RTX7 472 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 RHPN2Q8IUC4 686 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 CCDC105Q8IYK2 499 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 LPPQ93052 612 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 KLHL5Q96PQ7 755 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 CEP89Q96ST8 783 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 TMEM175Q9BSA9 504 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 SH3GLB2Q9NR46 395 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 SUCLA2Q9P2R7 463 aaPredicted RBP11.81□□□□□ -0.52
RFC4-201ENST00000296273 INPP5FQ9Y2H2 1132 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 CFAP54Q96N23 3096 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 DENND4AQ7Z401 1863 aa11.81□□□□□ -0.52
RFC4-201ENST00000296273 CNTNAP2Q9UHC6 1331 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 DKC1O60832 514 aaKnown RBP eCLIP11.8□□□□□ -0.529e-38■■■■■ 37.8
RFC4-201ENST00000296273 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
RFC4-201ENST00000296273 ALDH2P05091 517 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 CPA1P15085 419 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 SLC11A1P49279 550 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 ATL3Q6DD88 541 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 KANK3Q6NY19 840 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 FRMD5Q7Z6J6 570 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 CMASQ8NFW8 434 aaPredicted RBP11.8□□□□□ -0.52
RFC4-201ENST00000296273 STAMQ92783 540 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 FAM193BQ96PV7 902 aaPredicted RBP11.8□□□□□ -0.52
RFC4-201ENST00000296273 RHOBTB2Q9BYZ6 727 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 ZSCAN16Q9H4T2 348 aaPredicted RBP11.8□□□□□ -0.52
RFC4-201ENST00000296273 KCNK12Q9HB15 430 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 MRPL17Q9NRX2 175 aaKnown RBP11.8□□□□□ -0.52
RFC4-201ENST00000296273 AGPAT5Q9NUQ2 364 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 FBXL21Q9UKT6 434 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 PPME1Q9Y570 386 aa11.8□□□□□ -0.52
RFC4-201ENST00000296273 CYP3A7-CYP3A51PA0A087WV96 503 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 EDIL3O43854 480 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 LILRB3O75022 631 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 CNPP09543 421 aaKnown RBP11.79□□□□□ -0.52
RFC4-201ENST00000296273 IFNAR1P17181 557 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 NPR3P17342 541 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 CYP3A7P24462 503 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 ID4P47928 161 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 ANGPT1Q15389 498 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 NTRK3Q16288 839 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 MOXD1Q6UVY6 613 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 B3GNT9Q6UX72 402 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 ADSSL1Q8N142 457 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 CNNM3Q8NE01 707 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 TBCKQ8TEA7 893 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 BCL7CQ8WUZ0 217 aaPredicted RBP11.79□□□□□ -0.52
RFC4-201ENST00000296273 BRF1Q92994 677 aa11.79□□□□□ -0.52
RFC4-201ENST00000296273 PHKBQ93100 1093 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms