RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 PTGIRP43119 386 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 VAMP7P51809 220 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 SETQ01105 290 aaPredicted RBP17.98■□□□□ 0.47
RPN1-201ENST00000296255 ZYXQ15942 572 aaKnown RBP17.98■□□□□ 0.47
RPN1-201ENST00000296255 EPC2Q52LR7 807 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 C11orf63Q6NUN7 778 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 RPUSD2Q8IZ73 545 aaKnown RBP17.98■□□□□ 0.47
RPN1-201ENST00000296255 PRPF38AQ8NAV1 312 aaKnown RBP17.98■□□□□ 0.47
RPN1-201ENST00000296255 TLCD1Q96CP7 247 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 C18orf8Q96DM3 657 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 MXRA8Q9BRK3 442 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 FBXO28Q9NVF7 368 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 CTTNBP2NLQ9P2B4 639 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 DDX20Q9UHI6 824 aaKnown RBP17.98■□□□□ 0.47
RPN1-201ENST00000296255 ZBTB21Q9ULJ3 1066 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 SNX24Q9Y343 169 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 FAM187AA6NFU0 413 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 TCEAL1Q15170 157 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 PPP2R5EQ16537 467 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 SPDYCQ5MJ68 293 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 INTS8Q75QN2 995 aaKnown RBP17.98■□□□□ 0.47
RPN1-201ENST00000296255 LDHDQ86WU2 507 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 PRELID2Q8N945 189 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 EHMT1Q9H9B1 1298 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 LOXHD1Q8IVV2 1947 aa17.98■□□□□ 0.47
RPN1-201ENST00000296255 BRWD3Q6RI45 1802 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 YDJCA8MPS7 323 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 TMEM110-MUSTN1A8MSY1 372 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 CAND2O75155 1236 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 CHRNB2P17787 502 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 PLTPP55058 493 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 DHX34Q14147 1143 aaKnown RBP17.97■□□□□ 0.47
RPN1-201ENST00000296255 RNF187Q5TA31 235 aaPredicted RBP17.97■□□□□ 0.47
RPN1-201ENST00000296255 SUGP1Q8IWZ8 645 aaKnown RBP17.97■□□□□ 0.47
RPN1-201ENST00000296255 CHURC1Q8WUH1 139 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 PSMD1Q99460 953 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 RIT2Q99578 217 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 GRHL1Q9NZI5 618 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 CLRN2A0PK11 232 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 SGPL1O95470 568 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 IFFO1Q0D2I5 559 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 GRIPAP1Q4V328 841 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 UBAP2Q5T6F2 1119 aaKnown RBP17.97■□□□□ 0.47
RPN1-201ENST00000296255 TTC27Q6P3X3 843 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 FBXO25Q8TCJ0 367 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 RNF25Q96BH1 459 aaPredicted RBP17.97■□□□□ 0.47
RPN1-201ENST00000296255 ZSWIM1Q9BR11 485 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
RPN1-201ENST00000296255 PHF2O75151 1096 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 PEX5P50542 639 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 EIF3BP55884 814 aaKnown RBP17.96■□□□□ 0.47
RPN1-201ENST00000296255 GPC5P78333 572 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 KRT27Q7Z3Y8 459 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 CPNE8Q86YQ8 564 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 C3orf20Q8ND61 904 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 IL31RAQ8NI17 732 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 MDM1Q8TC05 714 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 ACP6Q9NPH0 428 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.96■□□□□ 0.471e-6■■■■■ 89.7
RPN1-201ENST00000296255 KCNH7Q9NS40 1196 aa17.96■□□□□ 0.47
RPN1-201ENST00000296255 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 DHX15O43143 795 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 ATMINO43313 823 aaPredicted RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 NUDT17P0C025 328 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 COMTP21964 271 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 CTNNA2P26232 953 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 PMS2P54278 862 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 DRG2P55039 364 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 BYSLQ13895 437 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 MIER3Q7Z3K6 550 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 NOP9Q86U38 636 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 CDAN1Q8IWY9 1227 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 TMEM174Q8WUU8 243 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 SH2D3AQ9BRG2 576 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 GLIS2Q9BZE0 524 aaPredicted RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 PABPC3Q9H361 631 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 VCPKMTQ9H867 229 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.95■□□□□ 0.46
RPN1-201ENST00000296255 HSPBP1Q9NZL4 362 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 NOCTQ9UK39 431 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 PNMA2Q9UL42 364 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 PCDHA3Q9Y5H8 950 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 PFASO15067 1338 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 SYNGAP1Q96PV0 1343 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 RTN2O75298 545 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 CHRNA5P30532 468 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 USP8P40818 1118 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 RPL21P46778 160 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 STYK1Q6J9G0 422 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 C12orf56Q8IXR9 622 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 UBL4BQ8N7F7 174 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 AGBL1Q96MI9 1066 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 ACCSQ96QU6 501 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 TMEM206Q9H813 350 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 LARSQ9P2J5 1176 aaKnown RBP17.95■□□□□ 0.46
RPN1-201ENST00000296255 RPTORQ8N122 1335 aa17.95■□□□□ 0.46
RPN1-201ENST00000296255 TCRBV7S2A1N4TA0A589 114 aa17.94■□□□□ 0.46
RPN1-201ENST00000296255 C5orf60A6NFR6 353 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms