RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 EURLQ9NYK6 297 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 ANO9A1A5B4 782 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 RNF103O00237 685 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 AGRPO00253 132 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 C4BPBP20851 252 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 MAPRE1Q15691 268 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 LRRC49Q8IUZ0 686 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 APPL1Q9UKG1 709 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 ABL1P00519 1130 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 BPIFB4P59827 614 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 CYP4A11Q02928 519 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 METTL13Q8N6R0 699 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 RTL3Q8N8U3 475 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 WDR60Q8WVS4 1066 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 C1orf54Q8WWF1 131 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 STK17AQ9UEE5 414 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 C1orf232A0A0U1RR37 186 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 TMEM120BA0PK00 339 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 TRIM24O15164 1050 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 FOXO3O43524 673 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 PPP6R2O75170 966 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 AGTP01019 485 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 RSRC2Q7L4I2 434 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 HAO1Q9UJM8 370 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 MYH3P11055 1940 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 E2F8A0AVK6 867 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 PDIA3P30101 505 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 PPARAQ07869 468 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 KYNUQ16719 465 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 IFNEQ86WN2 208 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 C4orf33Q8N1A6 199 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 SPATA4Q8NEY3 305 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 BCL10O95999 233 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 WLSQ5T9L3 541 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 LRRC53A6NM62 1247 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 RGS20O76081 388 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 NUP107P57740 925 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 BPIFA3Q9BQP9 254 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 RANBP17Q9H2T7 1088 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 KDM4CQ9H3R0 1056 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 RBMX2Q9Y388 322 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 SOX5P35711 763 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 HSPA13P48723 471 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 POU5F1BQ06416 359 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 POTEEQ6S8J3 1075 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 FRA10AC1Q70Z53 315 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 LPIN2Q92539 896 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 ZIM3Q96PE6 472 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 SHCBP1LQ9BZQ2 653 aa12.44□□□□□ -0.42
SHROOM3-201ENST00000296043 HSPA1AP0DMV8 641 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 HSPA1BP0DMV9 641 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 ZSCAN10Q96SZ4 725 aaPredicted RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 MAPK10P53779 464 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 FASTKD1Q53R41 847 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 KCNK16Q96T55 309 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 PRG4Q92954 1404 aaPredicted RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 EPRSP07814 1512 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 SNX2O60749 519 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 TJP3O95049 919 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 LLGL2Q6P1M3 1020 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 TINF2Q9BSI4 451 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 DSCC1Q9BVC3 393 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 IRX2Q9BZI1 471 aaPredicted RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 AMACRQ9UHK6 382 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 USP1O94782 785 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 ALKBH5Q6P6C2 394 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 AGBL2Q5U5Z8 902 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 KRT39Q6A163 491 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 URB1O60287 2271 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 ASAP2O43150 1006 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 IDH3BO43837 385 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 TRIM71Q2Q1W2 868 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 TAS2R42Q7RTR8 314 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 LRRC34Q8IZ02 419 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 TRAPPC9Q96Q05 1148 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 HSMCR30P0CW71 290 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 CASP1P29466 404 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 RESTQ13127 1097 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 ACAP1Q15027 740 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 DIS3LQ8TF46 1054 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 ABHD8Q96I13 439 aa12.43□□□□□ -0.42
SHROOM3-201ENST00000296043 PLCG1P19174 1290 aa12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 SOX6P35712 828 aa12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 CDC37Q16543 378 aaPredicted RBP12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 IMPG1Q17R60 797 aa12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 LRRC59Q96AG4 307 aaKnown RBP12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 GRIP2Q9C0E4 1043 aa12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 CLEC4MQ9H2X3 399 aaPredicted RBP12.42□□□□□ -0.42
SHROOM3-201ENST00000296043 NDST4Q9H3R1 872 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms