RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 ANKRD20A3Q5VUR7 823 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLPB-201ENST00000294053 TMC3Q7Z5M5 1100 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 EPS8L3Q8TE67 593 aaKnown RBP12.99□□□□□ -0.33
CLPB-201ENST00000294053 DDX23Q9BUQ8 820 aaKnown RBP12.99□□□□□ -0.33
CLPB-201ENST00000294053 WDR18Q9BV38 432 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 FAM129AQ9BZQ8 928 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 BMP2KQ9NSY1 1161 aaPredicted RBP12.99□□□□□ -0.33
CLPB-201ENST00000294053 GGA2Q9UJY4 613 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 CLIC2O15247 247 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 HIP1RO75146 1068 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 GNAT1P11488 350 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 ATP2A2P16615 1042 aaKnown RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 SEMA3FQ13275 785 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 FIGNQ5HY92 759 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 ERMARDQ5T6L9 678 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 MIS18BP1Q6P0N0 1132 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 ARMC9Q7Z3E5 817 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 HOOK3Q86VS8 718 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 CCDC65Q8IXS2 484 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 BATF3Q9NR55 127 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 TBK1Q9UHD2 729 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 KDM3AQ9Y4C1 1321 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 CYP3A7-CYP3A51PA0A087WV96 503 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 CYP3A7P24462 503 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 NR2F2P24468 414 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 PPP1R2P41236 205 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 CASP4P49662 377 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 CDK17Q00537 523 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 UBAP2Q5T6F2 1119 aaKnown RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 PKD2L1Q9P0L9 805 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 SNUPNO95149 360 aaKnown RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 FGFR1OPO95684 399 aaKnown RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 ZNF76P36508 570 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 SLC18A3Q16572 532 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 LACTB2Q53H82 288 aaPredicted RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 SLC30A9Q6PML9 568 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 ZNF572Q7Z3I7 529 aaPredicted RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 NSRP1Q9H0G5 558 aaKnown RBP12.98□□□□□ -0.33
CLPB-201ENST00000294053 ETNK1Q9HBU6 452 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
CLPB-201ENST00000294053 COL4A5P29400 1685 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 SLC9A1P19634 815 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 ECHS1P30084 290 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 SREBF1P36956 1147 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 INHBEP58166 350 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 PTK2Q05397 1052 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 TRIM59Q8IWR1 403 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 GMCL1Q96IK5 515 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 ETAA1Q9NY74 926 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 WRAP73Q9P2S5 460 aaPredicted RBP12.97□□□□□ -0.33
CLPB-201ENST00000294053 BCS1LQ9Y276 419 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 NEFHP12036 1026 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 HMGB2P26583 209 aaKnown RBP12.97□□□□□ -0.33
CLPB-201ENST00000294053 HNRNPH3P31942 346 aaKnown RBP12.97□□□□□ -0.33
CLPB-201ENST00000294053 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
CLPB-201ENST00000294053 VSIG1Q86XK7 387 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 SH2D3AQ9BRG2 576 aa12.97□□□□□ -0.33
CLPB-201ENST00000294053 CHORDC1Q9UHD1 332 aaPredicted RBP12.97□□□□□ -0.33
CLPB-201ENST00000294053 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 ACSL3O95573 720 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 STAT2P52630 851 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 KCNH2Q12809 1159 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 AP3B2Q13367 1082 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 ZC2HC1CQ53FD0 456 aaPredicted RBP12.96□□□□□ -0.33
CLPB-201ENST00000294053 AGBL2Q5U5Z8 902 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 ZNF449Q6P9G9 518 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 GJB7Q6PEY0 223 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 TPH2Q8IWU9 490 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 EIF2AK1Q9BQI3 630 aaKnown RBP12.96□□□□□ -0.33
CLPB-201ENST00000294053 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.334e-6■■■■□ 22.3
CLPB-201ENST00000294053 SEMA4AQ9H3S1 761 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 CNOT10Q9H9A5 744 aaKnown RBP12.96□□□□□ -0.33
CLPB-201ENST00000294053 EBF2Q9HAK2 575 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 PIDD1Q9HB75 910 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 IGLV3-22A0A075B6J6 115 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 RPA1P27694 616 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 PMS2P54278 862 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 RAD23BP54727 409 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 ADCY2Q08462 1091 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 ASTE1Q2TB18 679 aaPredicted RBP12.96□□□□□ -0.33
CLPB-201ENST00000294053 STYK1Q6J9G0 422 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 SEPT14Q6ZU15 432 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 FBXO25Q8TCJ0 367 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 MAGEC3Q8TD91 643 aa12.96□□□□□ -0.33
CLPB-201ENST00000294053 MRRFQ96E11 262 aaKnown RBP12.96□□□□□ -0.33
CLPB-201ENST00000294053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■■■■■ 250.4
CLPB-201ENST00000294053 PAPOLBQ9NRJ5 636 aaKnown RBP12.96□□□□□ -0.33
CLPB-201ENST00000294053 AJAP1Q9UKB5 411 aaPredicted RBP12.96□□□□□ -0.33
CLPB-201ENST00000294053 DAAM1Q9Y4D1 1078 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms