RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 NOTUMQ6P988 496 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 ECHDC2Q86YB7 292 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 SP7Q8TDD2 431 aaPredicted RBP29.66■■■□□ 2.34
SSU72-201ENST00000291386 TIFAQ96CG3 184 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 ZNF689Q96CS4 500 aaPredicted RBP29.66■■■□□ 2.34
SSU72-201ENST00000291386 USP25Q9UHP3 1055 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 PCDHB7Q9Y5E2 793 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 CNTNAP2Q9UHC6 1331 aa29.66■■■□□ 2.34
SSU72-201ENST00000291386 A0A1B0GUA9 196 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 H0YCG3 227 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 K7ERI5 159 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 ZNF623O75123 536 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 TBCAO75347 108 aaKnown RBP29.65■■■□□ 2.34
SSU72-201ENST00000291386 DGKIO75912 1065 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 EOMESO95936 686 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 PRKCBP05771 671 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 RAB27AP51159 221 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 NCKAP1LP55160 1127 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 AMPD3Q01432 767 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 FAM117BQ6P1L5 589 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 CNNM4Q6P4Q7 775 aa29.65■■■□□ 2.34
SSU72-201ENST00000291386 ZNF598Q86UK7 904 aaKnown RBP29.65■■■□□ 2.34
SSU72-201ENST00000291386 MYOGP15173 224 aa29.64■■■□□ 2.34
SSU72-201ENST00000291386 UBXN11Q5T124 520 aa29.64■■■□□ 2.34
SSU72-201ENST00000291386 DYMQ7RTS9 669 aa29.64■■■□□ 2.34
SSU72-201ENST00000291386 MYCT1Q8N699 235 aa29.64■■■□□ 2.34
SSU72-201ENST00000291386 TMEM161BQ8NDZ6 487 aa29.64■■■□□ 2.34
SSU72-201ENST00000291386 MRPS27Q92552 414 aaKnown RBP29.64■■■□□ 2.34
SSU72-201ENST00000291386 FAM105AQ9NUU6 356 aa29.64■■■□□ 2.34
SSU72-201ENST00000291386 LRFN2Q9ULH4 789 aa29.64■■■□□ 2.34
SSU72-201ENST00000291386 FRMD3A2A2Y4 597 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 SLC16A4O15374 487 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 B4GALT5O43286 388 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 SLFN14P0C7P3 912 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 CSPP1Q1MSJ5 1256 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 FIZ1Q96SL8 496 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 YME1L1Q96TA2 773 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 TRIM9Q9C026 710 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 NKX2-4Q9H2Z4 354 aa29.63■■■□□ 2.33
SSU72-201ENST00000291386 TRAK2O60296 914 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 CA3P07451 260 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 MAPTP10636 758 aaKnown RBP29.62■■■□□ 2.33
SSU72-201ENST00000291386 PRPF4BQ13523 1007 aaKnown RBP29.62■■■□□ 2.33
SSU72-201ENST00000291386 TAS1R3Q7RTX0 852 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 MRPL10Q7Z7H8 261 aaKnown RBP29.62■■■□□ 2.33
SSU72-201ENST00000291386 FSIP1Q8NA03 581 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 SLC17A8Q8NDX2 589 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 CPB2Q96IY4 423 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 C7orf25Q9BPX7 421 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 SEL1LQ9UBV2 794 aa29.62■■■□□ 2.33
SSU72-201ENST00000291386 FNDC1Q4ZHG4 1894 aaPredicted RBP29.61■■■□□ 2.33
SSU72-201ENST00000291386 ACTN4O43707 911 aaKnown RBP29.61■■■□□ 2.33
SSU72-201ENST00000291386 EDN1P05305 212 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 ATF7P17544 494 aaPredicted RBP29.61■■■□□ 2.33
SSU72-201ENST00000291386 GAP43P17677 238 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 SYKP43405 635 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 NDUFA8P51970 172 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 CEP57L1Q8IYX8 460 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 CNNM3Q8NE01 707 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 ST6GALNAC4Q9H4F1 302 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 SLC28A3Q9HAS3 691 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 SERTAD1Q9UHV2 236 aa29.61■■■□□ 2.33
SSU72-201ENST00000291386 LAMA2P24043 3122 aaKnown RBP29.6■■■□□ 2.33
SSU72-201ENST00000291386 LCHNA4D1U4 455 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 HOXA2O43364 376 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 ABCD1P33897 745 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 SLC27A1Q6PCB7 646 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 HAUS6Q7Z4H7 955 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 CMTR2Q8IYT2 770 aaKnown RBP29.6■■■□□ 2.33
SSU72-201ENST00000291386 STAMQ92783 540 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 GOLPH3LQ9H4A5 285 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 ZHX3Q9H4I2 956 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 PCDHB2Q9Y5E7 798 aa29.6■■■□□ 2.33
SSU72-201ENST00000291386 GOLGA6L4A6NEF3 574 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 TTLL13PA6NNM8 815 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 N4BP3O15049 544 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 LONRF3Q496Y0 759 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 ZNF697Q5TEC3 545 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 NT5DC1Q5TFE4 455 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 FAM178BQ8IXR5 827 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 TMEM87AQ8NBN3 555 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 RSPH1Q8WYR4 309 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 PGBD4Q96DM1 585 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 PDZD7Q9H5P4 517 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 RNF19AQ9NV58 838 aa29.59■■■□□ 2.33
SSU72-201ENST00000291386 TAP1Q03518 808 aa29.58■■■□□ 2.33
SSU72-201ENST00000291386 PPP2R2DQ66LE6 453 aa29.58■■■□□ 2.33
SSU72-201ENST00000291386 SFR1Q86XK3 245 aa29.58■■■□□ 2.33
SSU72-201ENST00000291386 EIF2AQ9BY44 585 aaKnown RBP29.58■■■□□ 2.33
SSU72-201ENST00000291386 MRPL4Q9BYD3 311 aaKnown RBP29.58■■■□□ 2.33
SSU72-201ENST00000291386 TTYH1Q9H313 450 aaPredicted RBP29.58■■■□□ 2.33
SSU72-201ENST00000291386 ZNF576Q9H609 170 aa29.58■■■□□ 2.33
SSU72-201ENST00000291386 OLFML3Q9NRN5 406 aa29.58■■■□□ 2.33
SSU72-201ENST00000291386 TNFSF13BQ9Y275 285 aa29.58■■■□□ 2.33
SSU72-201ENST00000291386 LINC01553A4QN01 128 aa29.57■■■□□ 2.32
SSU72-201ENST00000291386 ARHGEF15O94989 841 aa29.57■■■□□ 2.32
SSU72-201ENST00000291386 IDEP14735 1019 aa29.57■■■□□ 2.32
SSU72-201ENST00000291386 LIG1P18858 919 aa29.57■■■□□ 2.32
SSU72-201ENST00000291386 GTF2BQ00403 316 aa29.57■■■□□ 2.32
SSU72-201ENST00000291386 STRN3Q13033 797 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms