RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 FAM170AA1A519 330 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 F8VZ95 297 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 CEP104O60308 925 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 MAGEA10P43363 369 aaPredicted RBP8.2□□□□□ -1.1
TRIM6-201ENST00000278302 KLHL30Q0D2K2 578 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 TMEM62Q0P6H9 643 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 AP3B2Q13367 1082 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 ABCB5Q2M3G0 1257 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 UBAP2Q5T6F2 1119 aaKnown RBP8.2□□□□□ -1.1
TRIM6-201ENST00000278302 CATSPER3Q86XQ3 398 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 LMNTD2Q8IXW0 634 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 ADAM7Q9H2U9 754 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 FGFR1OP2Q9NVK5 253 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 MEIS2O14770 477 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 TTI1O43156 1089 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 PJA2O43164 708 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 ITGA4P13612 1032 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 NR2F2P24468 414 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 CNGA1P29973 690 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 SESN3P58005 492 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 PSMC6P62333 389 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 MRPS35P82673 323 aaKnown RBP8.2□□□□□ -1.1
TRIM6-201ENST00000278302 KCNH2Q12809 1159 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 ASIC2Q16515 512 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 FOXB2Q5VYV0 432 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 TMEM179Q6ZVK1 233 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 MIGA2Q7L4E1 593 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 KRT27Q7Z3Y8 459 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 FITM2Q8N6M3 262 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 TEX9Q8N6V9 391 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 PLEKHG4BQ96PX9 1271 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 DDX23Q9BUQ8 820 aaKnown RBP8.2□□□□□ -1.1
TRIM6-201ENST00000278302 PACSIN1Q9BY11 444 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 PCDHA2Q9Y5H9 948 aa8.2□□□□□ -1.1
TRIM6-201ENST00000278302 MYH4Q9Y623 1939 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 CYP3A7-CYP3A51PA0A087WV96 503 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 SNX3O60493 162 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 NOL4O94818 638 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 NPTXRO95502 500 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 CYP3A7P24462 503 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 SLC12A3P55017 1021 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 CYP4A11Q02928 519 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 KLC1Q07866 573 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ARSHQ5FYA8 562 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 TCERG1LQ5VWI1 586 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 HGSNATQ68CP4 663 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 TRIM59Q8IWR1 403 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 RNF10Q8N5U6 811 aaKnown RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 FAM133AQ8N9E0 248 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ZFAND2BQ8WV99 257 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 KCTD10Q9H3F6 313 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 CNOT10Q9H9A5 744 aaKnown RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ARHGEF3Q9NR81 526 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 FAM198AQ9UFP1 575 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 HDAC9Q9UKV0 1011 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 SLC26A4O43511 780 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 CALUO43852 315 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 FOSP01100 380 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 MMP10P09238 476 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 MYBP10242 640 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 HOXA13P31271 388 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 CUL1Q13616 776 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 GIT2Q14161 759 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ASTE1Q2TB18 679 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 SYDE2Q5VT97 1194 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 PPP4R3CPQ6ZMV5 832 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ARHGAP27Q6ZUM4 889 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 SFR1Q86XK3 245 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ATL2Q8NHH9 583 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 FBF1Q8TES7 1133 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 MAIP1Q8WWC4 291 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 SYN2Q92777 582 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 KIFAP3Q92845 792 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 TLCD1Q96CP7 247 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 PBKQ96KB5 322 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 FGD4Q96M96 766 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 RAB17Q9H0T7 212 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 MMADHCQ9H3L0 296 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 AZI2Q9H6S1 392 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ETNK1Q9HBU6 452 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 ARMCX3Q9UH62 379 aaPredicted RBP8.19□□□□□ -1.1
TRIM6-201ENST00000278302 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 PITPNM2Q9BZ72 1349 aa8.19□□□□□ -1.1
TRIM6-201ENST00000278302 GOLGA6L10A0A0M3HER8 536 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 ECE2O60344 883 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 NDUFB10O96000 172 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 BMP3P12645 472 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 TAL1P17542 331 aaPredicted RBP8.18□□□□□ -1.1
TRIM6-201ENST00000278302 GM2AP17900 193 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 GNAZP19086 355 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 HMGB2P26583 209 aaKnown RBP8.18□□□□□ -1.1
TRIM6-201ENST00000278302 RPA1P27694 616 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 BNIP1Q12981 228 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 PLS1Q14651 629 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 EDRF1Q3B7T1 1238 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 DCAF17Q5H9S7 520 aaPredicted RBP8.18□□□□□ -1.1
TRIM6-201ENST00000278302 STRIP1Q5VSL9 837 aa8.18□□□□□ -1.1
TRIM6-201ENST00000278302 MOXD1Q6UVY6 613 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms