RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 IFT81Q8WYA0 676 aa11.21□□□□□ -0.62
UPF3B-201ENST00000276201 CCDC114Q96M63 670 aa11.21□□□□□ -0.62
UPF3B-201ENST00000276201 AGBL1Q96MI9 1066 aa11.21□□□□□ -0.62
UPF3B-201ENST00000276201 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.62
UPF3B-201ENST00000276201 CPVLQ9H3G5 476 aa11.21□□□□□ -0.62
UPF3B-201ENST00000276201 BLOC1S4Q9NUP1 217 aa11.21□□□□□ -0.62
UPF3B-201ENST00000276201 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.62
UPF3B-201ENST00000276201 BZW2Q9Y6E2 419 aaKnown RBP11.21□□□□□ -0.62
UPF3B-201ENST00000276201 CENPFP49454 3210 aa11.21□□□□□ -0.62
UPF3B-201ENST00000276201 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 hCG_1984214I3L0E3 225 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 HOXC6P09630 235 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 ZNF844Q08AG5 666 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 RIPK1Q13546 671 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 PDIA5Q14554 519 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 NONOQ15233 471 aaKnown RBP eCLIP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 UAP1Q16222 522 aaPredicted RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 TLDC1Q6P9B6 456 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 CACNA2D3Q8IZS8 1091 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 ABRAQ8N0Z2 381 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 ZNF713Q8N859 430 aaPredicted RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 NPLOC4Q8TAT6 608 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 TAF4BQ92750 862 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 TLCD1Q96CP7 247 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 SEC16BQ96JE7 1060 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 OSBPL7Q9BZF2 842 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 BIN2Q9UBW5 565 aaPredicted RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 TTC7AQ9ULT0 858 aaPredicted RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 NENFQ9UMX5 172 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 A0A0A6YYK5 440 aaPredicted RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 KIF4AO95239 1232 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 HMGCRP04035 888 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 GCFC2P16383 781 aaKnown RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 TAL1P17542 331 aaPredicted RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 SEC24CP53992 1094 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 NPEPPSP55786 919 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 LMNB2Q03252 620 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 TRIM32Q13049 653 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 GRB10Q13322 594 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 BYSLQ13895 437 aaKnown RBP11.2□□□□□ -0.62
UPF3B-201ENST00000276201 MTFR1Q15390 333 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 PPP2R5EQ16537 467 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 MAATS1Q7Z4T9 603 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 MTMR9Q96QG7 549 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 MMP19Q99542 508 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 UBA5Q9GZZ9 404 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 RABEP2Q9H5N1 569 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 FLRT1Q9NZU1 646 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 INTUQ9ULD6 942 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 COL4A3BPQ9Y5P4 624 aa11.2□□□□□ -0.62
UPF3B-201ENST00000276201 MYMKA6NI61 221 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 GNA11P29992 359 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 GUCY2FP51841 1108 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 RPS6KA1Q15418 735 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 TMEM119Q4V9L6 283 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 CRELD2Q6UXH1 353 aaPredicted RBP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 SLFN11Q7Z7L1 901 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 NEK8Q86SG6 692 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 CROCCP2Q86T23 111 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 CCT6BQ92526 530 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 TXLNGYQ9BZA5 131 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 CD248Q9HCU0 757 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 FAM114A2Q9NRY5 505 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 HOMER2Q9NSB8 354 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 ODF2LQ9ULJ1 636 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 RBBP6Q7Z6E9 1792 aaKnown RBP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 KIAA0100Q14667 2235 aaKnown RBP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 BUB1O43683 1085 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 ICAM1P05362 532 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 CCL5P13501 91 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 EZRP15311 586 aaKnown RBP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 DRD4P21917 467 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 KLRC1P26715 233 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 SCTRP47872 440 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 SLC8A3P57103 927 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 UBXN2AP68543 259 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 ITIH4Q14624 930 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 LRRC57Q8N9N7 239 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 RAD54LQ92698 747 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.624e-6■□□□□ 8.7
UPF3B-201ENST00000276201 MIEF2Q96C03 454 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 PNMA5Q96PV4 448 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 CCDC134Q9H6E4 229 aa11.19□□□□□ -0.62
UPF3B-201ENST00000276201 DIS3Q9Y2L1 958 aaKnown RBP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 ZNFX1Q9P2E3 1918 aaKnown RBP11.19□□□□□ -0.62
UPF3B-201ENST00000276201 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
UPF3B-201ENST00000276201 DNM1LO00429 736 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 ASAP2O43150 1006 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 GFPT2O94808 682 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 IGHA2P01877 340 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 PGK2P07205 417 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 KCTD2Q14681 263 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 SLMAPQ14BN4 828 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
UPF3B-201ENST00000276201 GKAP1Q5VSY0 366 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms