RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CLTCL1P53675 1640 aa8.46□□□□□ -1.05
LIMD1-201ENST00000273317 NR5A1Q13285 461 aa8.46□□□□□ -1.05
LIMD1-201ENST00000273317 MMTAG2Q9BU76 263 aaKnown RBP8.46□□□□□ -1.05
LIMD1-201ENST00000273317 PCIF1Q9H4Z3 704 aa8.46□□□□□ -1.05
LIMD1-201ENST00000273317 MORC2Q9Y6X9 1032 aaPredicted RBP8.46□□□□□ -1.05
LIMD1-201ENST00000273317 LRRC53A6NM62 1247 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 APOL1O14791 398 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 KDM1AO60341 852 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 COBLO75128 1261 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 COPB2P35606 906 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 CDC26Q8NHZ8 85 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 GOLPH3LQ9H4A5 285 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 RAD23BP54727 409 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 TERB1Q8NA31 727 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 BATF3Q9NR55 127 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 ZHX2Q9Y6X8 837 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 WBP4O75554 376 aaKnown RBP8.46□□□□□ -1.06
LIMD1-201ENST00000273317 HSPA13P48723 471 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 PFKFB3Q16875 520 aaPredicted RBP8.46□□□□□ -1.06
LIMD1-201ENST00000273317 FAM98CQ17RN3 349 aaKnown RBP8.46□□□□□ -1.06
LIMD1-201ENST00000273317 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.06
LIMD1-201ENST00000273317 LCORLQ8N3X6 602 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 TSSK1BQ9BXA7 367 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 NSMCE4AQ9NXX6 385 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 FEM1BQ9UK73 627 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 DAB1O75553 588 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 ZBTB5O15062 677 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 TBC1D4O60343 1298 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 CCDC159P0C7I6 412 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 HSPA1AP0DMV8 641 aaKnown RBP8.46□□□□□ -1.06
LIMD1-201ENST00000273317 HSPA1BP0DMV9 641 aaKnown RBP8.46□□□□□ -1.06
LIMD1-201ENST00000273317 SDC4P31431 198 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 S100A5P33763 92 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 NSUN2Q08J23 767 aaKnown RBP eCLIP8.46□□□□□ -1.06
LIMD1-201ENST00000273317 TMEM179Q6ZVK1 233 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 RHOT1Q8IXI2 618 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 RASGRP4Q8TDF6 673 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 ULK4Q96C45 1275 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 C2orf40Q9H1Z8 148 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 ABCB11O95342 1321 aa8.46□□□□□ -1.06
LIMD1-201ENST00000273317 SMAPO00193 183 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ANP32DO95626 131 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 TIPINQ9BVW5 301 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 TBC1D22BQ9NU19 505 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 GNAT1P11488 350 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 HIF1AQ16665 826 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 FRMD5Q7Z6J6 570 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ZBTB33Q86T24 672 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 KCNV2Q8TDN2 545 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 RFFLQ8WZ73 363 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 SETBP1Q9Y6X0 1596 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 H0Y3Z8 333 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 K7ERI5 159 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 SPAG6O75602 509 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ARMC2Q8NEN0 867 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 KRT35Q92764 455 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 EHD2Q9NZN4 543 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 HNRNPH2P55795 449 aaKnown RBP8.45□□□□□ -1.06
LIMD1-201ENST00000273317 TMEM259Q4ZIN3 620 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 EFHC2Q5JST6 749 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 PDXDC2PQ6P474 469 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 RAB42Q8N4Z0 105 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 BFARQ9NZS9 450 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ARAP3Q8WWN8 1544 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 E5RI56 91 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ANGPT2O15123 496 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 PRKG1Q13976 671 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 P3H1Q32P28 736 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 HEATR6Q6AI08 1181 aaKnown RBP8.45□□□□□ -1.06
LIMD1-201ENST00000273317 BEST2Q8NFU1 509 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 FBXO40Q9UH90 709 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 APOA4P06727 396 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 PSMC1P62191 440 aaKnown RBP8.45□□□□□ -1.06
LIMD1-201ENST00000273317 GRM4Q14833 912 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 TRIM54Q9BYV2 358 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
LIMD1-201ENST00000273317 KIAA1210Q9ULL0 1709 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 HLA-DPA1P20036 260 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 NLRP10Q86W26 655 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 SPICE1Q8N0Z3 855 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 MYO3BQ8WXR4 1341 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 PITPNM2Q9BZ72 1349 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 DYTNA2CJ06 578 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 HADHAP40939 763 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 KRT76Q01546 638 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 AASDHQ4L235 1098 aaPredicted RBP8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ANKS3Q6ZW76 656 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 POLE3Q9NRF9 147 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 ZNF229Q9UJW7 825 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 MADDQ8WXG6 1647 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 PSMD3O43242 534 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 GPC3P51654 580 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 AGBL2Q5U5Z8 902 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 NDEL1Q9GZM8 345 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 USP21Q9UK80 565 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 SNX24Q9Y343 169 aa8.45□□□□□ -1.06
LIMD1-201ENST00000273317 FRMPD1Q5SYB0 1578 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms