RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CCDC15Q0P6D6 951 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 RCN1Q15293 331 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 PDXDC1Q6P996 788 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 A0A087X0T9 212 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 TMEM120BA0PK00 339 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 CCDC169A6NNP5 214 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 DDAH1O94760 285 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 ASLP04424 464 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 HNRNPCP07910 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 ITGA2BP08514 1039 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 FAM228BP0C875 321 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 T-ENOLP0DO92 83 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 FCER1AP12319 257 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 SKIP12755 728 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 FGFR4P22455 802 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 MCM7P33993 719 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 GJA8P48165 433 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 GIT2Q14161 759 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 MPP2Q14168 576 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 ADAT2Q7Z6V5 191 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 GIMAP8Q8ND71 665 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 DTX3LQ8TDB6 740 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 DYDC2Q96IM9 177 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 INIPQ9NRY2 104 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 ZDHHC18Q9NUE0 388 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 SUGT1Q9Y2Z0 365 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 RPTORQ8N122 1335 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 DLEC1Q9Y238 1755 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 POLRMTO00411 1230 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 AGTP01019 485 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 LYNP07948 512 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 PLTPP55058 493 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 STK4Q13043 487 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 CCDC6Q16204 474 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 VSIG1Q86XK7 387 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 CYP4X1Q8N118 509 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 ACTRT1Q8TDG2 376 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 P2RX5Q93086 422 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 CORO1BQ9BR76 489 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 RTFDC1Q9BY42 306 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 TXLNGQ9NUQ3 528 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 KLHL14Q9P2G3 628 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 PDP2Q9P2J9 529 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 MROH7Q68CQ1 1323 aa16.88■□□□□ 0.29
CTDSP1-201ENST00000273062 RBAK-RBAKDNI3L0D1 243 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 PCP11498 1178 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 VARSP26640 1264 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 KRT2P35908 639 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 AUHQ13825 339 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 LIN52Q52LA3 116 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 DSTYKQ6XUX3 929 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 ZBTB8BQ8NAP8 495 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 IQCDQ96DY2 449 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.87■□□□□ 0.291e-10■■□□□ 14.2
CTDSP1-201ENST00000273062 SPATA7Q9P0W8 599 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 GGA1Q9UJY5 639 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 CHKBQ9Y259 395 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 UTP11Q9Y3A2 253 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 VIL1P09327 827 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 POLD1P28340 1107 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 BTDP43251 543 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 SETDB1Q15047 1291 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 WDR72Q3MJ13 1102 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 VSTM1Q6UX27 236 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 FBXO25Q8TCJ0 367 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 GLG1Q92896 1179 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 ADAMTS1Q9UHI8 967 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 SLC4A7Q9Y6M7 1214 aa16.87■□□□□ 0.29
CTDSP1-201ENST00000273062 CCDC166P0CW27 439 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 USP11P51784 963 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 POU5F1Q01860 360 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 OCRLQ01968 901 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 KLRC3Q07444 240 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 ADCY1Q08828 1119 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 VWA3BQ502W6 1294 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 RNF168Q8IYW5 571 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 AGGF1Q8N302 714 aaeCLIP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 RIBC1Q8N443 379 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 GPKOWQ92917 476 aaPredicted RBP eCLIP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 LENG1Q96BZ8 264 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 DCLRE1BQ9H816 532 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 STOML1Q9UBI4 398 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 SEC63Q9UGP8 760 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 TBX10O75333 385 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 DAAM2Q86T65 1068 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 MKL1Q969V6 931 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 DHTKD1Q96HY7 919 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 TGS1Q96RS0 853 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 COMMD3-BMI1R4GMX3 469 aa16.86■□□□□ 0.29
CTDSP1-201ENST00000273062 SSU72P8A0A1W2PR75 194 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms