RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 COMTP21964 271 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 C6orf118Q5T5N4 469 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 KIRREL3Q8IZU9 778 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 MLXIPLQ9NP71 852 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 ACP6Q9NPH0 428 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 EIF3DO15371 548 aaKnown RBP eCLIP29.62■■■□□ 2.33
CBX4-201ENST00000269397 PYGMP11217 842 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 ACCSLQ4AC99 568 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 SIAH1Q8IUQ4 282 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 CCDC105Q8IYK2 499 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 FIZ1Q96SL8 496 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 PCIF1Q9H4Z3 704 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 AGAP1Q9UPQ3 857 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 SYNGAP1Q96PV0 1343 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 TISP43B9A030 160 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 RASGRF2O14827 1237 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 RIPK2O43353 540 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 SCP2P22307 547 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 CHRNA3P32297 505 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 DRG2P55039 364 aaKnown RBP29.62■■■□□ 2.33
CBX4-201ENST00000269397 ODR4Q5SWX8 454 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 MAEAQ7L5Y9 396 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 ZNF720Q7Z2F6 126 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 UBL4BQ8N7F7 174 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 HSD17B14Q9BPX1 270 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 ZSWIM1Q9BR11 485 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 MTRF1LQ9UGC7 380 aaKnown RBP29.62■■■□□ 2.33
CBX4-201ENST00000269397 SLC12A4Q9UP95 1085 aa29.62■■■□□ 2.33
CBX4-201ENST00000269397 GDF11O95390 407 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 AGTP01019 485 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 ADCY2Q08462 1091 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 TRPM8Q7Z2W7 1104 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 ARHGEF19Q8IW93 802 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 PCDHA3Q9Y5H8 950 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 F5H6K3 240 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 CREB1P16220 341 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 AUHQ13825 339 aaKnown RBP29.61■■■□□ 2.33
CBX4-201ENST00000269397 LONRF1Q17RB8 773 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 CERKLQ49MI3 558 aaPredicted RBP29.61■■■□□ 2.33
CBX4-201ENST00000269397 TAX1BP1Q86VP1 789 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 RPUSD2Q8IZ73 545 aaKnown RBP29.61■■■□□ 2.33
CBX4-201ENST00000269397 DCAF4Q8WV16 495 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 SUFUQ9UMX1 484 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 ADAMTSL1Q8N6G6 1762 aa29.61■■■□□ 2.33
CBX4-201ENST00000269397 KIF22Q14807 665 aa29.6■■■□□ 2.33
CBX4-201ENST00000269397 APOBEC3HQ6NTF7 200 aaKnown RBP29.6■■■□□ 2.33
CBX4-201ENST00000269397 RHOT2Q8IXI1 618 aa29.6■■■□□ 2.33
CBX4-201ENST00000269397 SYCP3Q8IZU3 236 aa29.6■■■□□ 2.33
CBX4-201ENST00000269397 KAT5Q92993 513 aa29.6■■■□□ 2.33
CBX4-201ENST00000269397 DDX23Q9BUQ8 820 aaKnown RBP29.6■■■□□ 2.33
CBX4-201ENST00000269397 WRAP73Q9P2S5 460 aaPredicted RBP29.6■■■□□ 2.33
CBX4-201ENST00000269397 C21orf2O43822 256 aa29.6■■■□□ 2.33
CBX4-201ENST00000269397 COL23A1Q86Y22 540 aaPredicted RBP29.6■■■□□ 2.33
CBX4-201ENST00000269397 WDR18Q9BV38 432 aa29.6■■■□□ 2.33
CBX4-201ENST00000269397 VEZTQ9HBM0 779 aa29.6■■■□□ 2.33
CBX4-201ENST00000269397 DDTLA6NHG4 134 aaPredicted RBP29.59■■■□□ 2.33
CBX4-201ENST00000269397 SERPINB2P05120 415 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 BFSP1Q12934 665 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 MKNK1Q9BUB5 465 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 CTNNA2P26232 953 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 ITIH4Q14624 930 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 CNGA2Q16280 664 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 SPICE1Q8N0Z3 855 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 LMO3Q8TAP4 145 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 PCYOX1Q9UHG3 505 aa29.59■■■□□ 2.33
CBX4-201ENST00000269397 ACSL3O95573 720 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 ICA1Q05084 483 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 SEL1L2Q5TEA6 688 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 OTOP1Q7RTM1 612 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 RPAINQ86UA6 219 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 DYDC1Q8WWB3 177 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 CCDC17Q96LX7 622 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 BBOX1O75936 387 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 SLC8A1P32418 973 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 PEX5P50542 639 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 LRCH2Q5VUJ6 765 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 EXOC3L1Q86VI1 746 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 CERKQ8TCT0 537 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 DNAJC17Q9NVM6 304 aaKnown RBP29.58■■■□□ 2.33
CBX4-201ENST00000269397 DMAC2Q9NW81 257 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 CNOT7Q9UIV1 285 aaKnown RBP29.58■■■□□ 2.33
CBX4-201ENST00000269397 L3MBTL1Q9Y468 752 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 EMSYQ7Z589 1322 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 UBOX5O94941 541 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 CIITAP33076 1130 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 MAGEC3Q8TD91 643 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 STAMBPL1Q96FJ0 436 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 PCDHB18PQ96TA0 734 aa29.58■■■□□ 2.33
CBX4-201ENST00000269397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.58■■■□□ 2.333e-8■■■■■ 30.4
CBX4-201ENST00000269397 IGLV3-22A0A075B6J6 115 aa29.57■■■□□ 2.32
CBX4-201ENST00000269397 PODXLO00592 558 aa29.57■■■□□ 2.32
CBX4-201ENST00000269397 HGSO14964 777 aaPredicted RBP29.57■■■□□ 2.32
CBX4-201ENST00000269397 FOSP01100 380 aaPredicted RBP29.57■■■□□ 2.32
CBX4-201ENST00000269397 KCNJ2P63252 427 aa29.57■■■□□ 2.32
CBX4-201ENST00000269397 GPC5P78333 572 aa29.57■■■□□ 2.32
CBX4-201ENST00000269397 FGFR1OP2Q9NVK5 253 aa29.57■■■□□ 2.32
CBX4-201ENST00000269397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.57■■■□□ 2.32
CBX4-201ENST00000269397 MIF4GDA9UHW6 222 aaKnown RBP29.57■■■□□ 2.32
CBX4-201ENST00000269397 NDUFB10O96000 172 aa29.57■■■□□ 2.32
CBX4-201ENST00000269397 GCLMP48507 274 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms