RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TAS2R14Q9NYV8 317 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 SUCLA2Q9P2R7 463 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 TCEAL9Q9UHQ7 104 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 COL11A1P12107 1806 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 GOLGA8KD6RF30 607 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 SLC16A4O15374 487 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 TMEM253P0C7T8 217 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 GCLMP48507 274 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 MYBPC2Q14324 1141 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 ALS2CLQ60I27 953 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 PALB2Q86YC2 1186 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 LMO3Q8TAP4 145 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 SLC35G2Q8TBE7 412 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 SLC20A1Q8WUM9 679 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 CTNNBL1Q8WYA6 563 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 RFFLQ8WZ73 363 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 ZIM3Q96PE6 472 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 TRERF1Q96PN7 1200 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 ZIC5Q96T25 663 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 SH3GL2Q99962 352 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.98□□□□□ -0.177e-7■□□□□ 9.9
CPSF6-201ENST00000266679 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.179e-7■■■■■ 39.5
CPSF6-201ENST00000266679 HSPBP1Q9NZL4 362 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 WDR81Q562E7 1941 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 DOCK1Q14185 1865 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 OPA1O60313 960 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 BUB1BO60566 1050 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 MAPTP10636 758 aaKnown RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 VCAM1P19320 739 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 LBX1P52954 281 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 HUNKP57058 714 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 ERVK-9P63128 1117 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 GHRHRQ02643 423 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 PPP3CAQ08209 521 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 ALCAMQ13740 583 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 KCTD19Q17RG1 926 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 PRAMEF18Q5VWM3 479 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 LRRC31Q6UY01 552 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 NSMFQ6X4W1 530 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 INTS8Q75QN2 995 aaKnown RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 SCFD2Q8WU76 684 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 UBE2TQ9NPD8 197 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 CWC15Q9P013 229 aaKnown RBP13.97□□□□□ -0.17
CPSF6-201ENST00000266679 AMFRQ9UKV5 643 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 PPP1R9AQ9ULJ8 1098 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 DOCK5Q9H7D0 1870 aa13.97□□□□□ -0.17
CPSF6-201ENST00000266679 TESPA1A2RU30 521 aaPredicted RBP13.96□□□□□ -0.17
CPSF6-201ENST00000266679 GOLGA8IPA6NC78 632 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 GOLGA8JA6NMD2 632 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 KRIT1O00522 736 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 ATP9AO75110 1047 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 NPEPPSP55786 919 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 PEX3P56589 373 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 KIF22Q14807 665 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 TTMPQ5BVD1 217 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 FAM102BQ5T8I3 360 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 FOXR1Q6PIV2 292 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 HAUS6Q7Z4H7 955 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 SULF1Q8IWU6 871 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 PLEKHO2Q8TD55 490 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 ARL8AQ96BM9 186 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 DDX47Q9H0S4 455 aaKnown RBP13.96□□□□□ -0.17
CPSF6-201ENST00000266679 TBC1D22BQ9NU19 505 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 ARID2Q68CP9 1835 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 LYPLA2O95372 231 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 CCNE2O96020 404 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 ITGA4P13612 1032 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 HLTFQ14527 1009 aaKnown RBP eCLIP13.96□□□□□ -0.17
CPSF6-201ENST00000266679 XKR9Q5GH70 373 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 C1orf220Q5T0J3 134 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 CFAP58Q5T655 872 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 XXYLT1Q8NBI6 393 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 CDCA5Q96FF9 252 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 RMDN3Q96TC7 470 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 AGPAT1Q99943 283 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 THAP2Q9H0W7 228 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 PXMP2Q9NR77 195 aa13.96□□□□□ -0.17
CPSF6-201ENST00000266679 KIAA1217Q5T5P2 1943 aa13.96□□□□□ -0.18
CPSF6-201ENST00000266679 CASP8AP2Q9UKL3 1982 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 ZBED4O75132 1171 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 ADRB2P07550 413 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 RFX1P22670 979 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 USP8P40818 1118 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 EPC2Q52LR7 807 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 RNF207Q6ZRF8 634 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 FMNL3Q8IVF7 1028 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 C12orf56Q8IXR9 622 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 HES6Q96HZ4 224 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
CPSF6-201ENST00000266679 PDCD2LQ9BRP1 358 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 KIFC3Q9BVG8 833 aa13.95□□□□□ -0.18
CPSF6-201ENST00000266679 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
CPSF6-201ENST00000266679 DAAM1Q9Y4D1 1078 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms