RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 JAK3P52333 1124 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 PEX3P56589 373 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 PSMC5P62195 406 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 GTF2BQ00403 316 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 PPP3CAQ08209 521 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 BIRC2Q13490 618 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 FOXR1Q6PIV2 292 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 SRLQ86TD4 932 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 ZBED3Q96IU2 234 aaPredicted RBP11.15□□□□□ -0.63
LSG1-201ENST00000265245 TSPYL1Q9H0U9 437 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 THAP2Q9H0W7 228 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 CARD9Q9H257 536 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 ST6GALNAC4Q9H4F1 302 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 AMACRQ9UHK6 382 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 TTC7AQ9ULT0 858 aaPredicted RBP11.15□□□□□ -0.63
LSG1-201ENST00000265245 EXOC7Q9UPT5 735 aa11.15□□□□□ -0.63
LSG1-201ENST00000265245 RRP15Q9Y3B9 282 aaKnown RBP11.15□□□□□ -0.63
LSG1-201ENST00000265245 ZNF233A6NK53 670 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 PHF20L1A8MW92 1017 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 TULP2O00295 520 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 MAPK13O15264 365 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 ZBED4O75132 1171 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 SFNP31947 248 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 USP8P40818 1118 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 SMTNP53814 917 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 GNGT1P63211 74 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 KRT76Q01546 638 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 PPATQ06203 517 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 CLUL1Q15846 466 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 PPP2R5EQ16537 467 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 KCTD16Q68DU8 428 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 CIAPIN1Q6FI81 312 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 CD302Q8IX05 232 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 TAAR1Q96RJ0 339 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 RMDN3Q96TC7 470 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 PPP1R9AQ9ULJ8 1098 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 SLC16A4O15374 487 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 ITGA4P13612 1032 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 XKR9Q5GH70 373 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 FAM102BQ5T8I3 360 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 ARHGEF26Q96DR7 871 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 PLCD4Q9BRC7 762 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 RASSF4Q9H2L5 321 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 GINM1Q9NU53 330 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 TAS2R14Q9NYV8 317 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 CTTNBP2NLQ9P2B4 639 aa11.14□□□□□ -0.63
LSG1-201ENST00000265245 UTP11Q9Y3A2 253 aaKnown RBP11.14□□□□□ -0.63
LSG1-201ENST00000265245 ASTN2O75129 1339 aaPredicted RBP11.14□□□□□ -0.63
LSG1-201ENST00000265245 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
LSG1-201ENST00000265245 BACH1O14867 736 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 PGM5Q15124 567 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 EPC2Q52LR7 807 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 NSMFQ6X4W1 530 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 PALB2Q86YC2 1186 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 JDP2Q8WYK2 163 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 RNPC3Q96LT9 517 aaKnown RBP11.13□□□□□ -0.63
LSG1-201ENST00000265245 SCAF8Q9UPN6 1271 aaKnown RBP11.13□□□□□ -0.63
LSG1-201ENST00000265245 PFASO15067 1338 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 CCDC169A6NNP5 214 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 MYO1CO00159 1063 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 EIF3HO15372 352 aaKnown RBP eCLIP11.13□□□□□ -0.63
LSG1-201ENST00000265245 FTLP02792 175 aaPredicted RBP11.13□□□□□ -0.63
LSG1-201ENST00000265245 SKOR1P84550 965 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 ARHGEF16Q5VV41 709 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 RNF207Q6ZRF8 634 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 ARHGEF19Q8IW93 802 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 SLC20A1Q8WUM9 679 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 PDCD2LQ9BRP1 358 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 GPRC5CQ9NQ84 441 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 ANKEF1Q9NU02 776 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 PLAAQ9Y263 795 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 BCS1LQ9Y276 419 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 CTNND1O60716 968 aaKnown RBP11.13□□□□□ -0.63
LSG1-201ENST00000265245 DMP1Q13316 513 aaPredicted RBP11.13□□□□□ -0.63
LSG1-201ENST00000265245 MTMR3Q13615 1198 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 CEP85LQ5SZL2 805 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 DDX42Q86XP3 938 aaKnown RBP eCLIP11.13□□□□□ -0.63
LSG1-201ENST00000265245 SH2D3CQ8N5H7 860 aa11.13□□□□□ -0.63
LSG1-201ENST00000265245 GEMIN8Q9NWZ8 242 aaKnown RBP11.13□□□□□ -0.63
LSG1-201ENST00000265245 TMEM150BA6NC51 233 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 MIF4GDA9UHW6 222 aaKnown RBP11.12□□□□□ -0.63
LSG1-201ENST00000265245 HMGB1P1B2RPK0 211 aaPredicted RBP11.12□□□□□ -0.63
LSG1-201ENST00000265245 TTI1O43156 1089 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 VCAM1P19320 739 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 NCKAP1LP55160 1127 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 SPP2Q13103 211 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 UGCGQ16739 394 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 LRIG3Q6UXM1 1119 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 USP37Q86T82 979 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 PPM1KQ8N3J5 372 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
LSG1-201ENST00000265245 BCAS4Q8TDM0 211 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 RAB17Q9H0T7 212 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 FAM114A2Q9NRY5 505 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 COL4A5P29400 1685 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 FAM170AA1A519 330 aa11.12□□□□□ -0.63
LSG1-201ENST00000265245 PMM2O15305 246 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms