RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ITIH2P19823 946 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 CYP3A7P24462 503 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 GPC5P78333 572 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 TSNAXIP1Q2TAA8 658 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 VSTM1Q6UX27 236 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 EGFL6Q8IUX8 553 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 ANKRD42Q8N9B4 389 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 INPP5DQ92835 1189 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 ARHGEF26Q96DR7 871 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 LRMDAQ9H2I8 198 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 ACTL7BQ9Y614 415 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 FRMPD2Q68DX3 1309 aaPredicted RBP13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 IGSF9BQ9UPX0 1349 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 RGL2O15211 777 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 EIF3DO15371 548 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 MED24O75448 989 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 BRAFP15056 766 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 PECAM1P16284 738 aaPredicted RBP13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 GNAZP19086 355 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 MAN1A1P33908 653 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 HOXD13P35453 343 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 FMO5P49326 533 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 IL9RQ01113 521 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 RRP1BQ14684 758 aaKnown RBP13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 LBRQ14739 615 aaKnown RBP13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 KIF22Q14807 665 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 LONRF1Q17RB8 773 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 ZNF568Q3ZCX4 644 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 C12orf50Q8NA57 414 aaPredicted RBP13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 PIGOQ8TEQ8 1089 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 BORCS6Q96GS4 357 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 NLRP3Q96P20 1036 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 ASTN1O14525 1302 aa13.3□□□□□ -0.28
CHMP2B-201ENST00000263780 A8MUI8 341 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 GCNT3O95395 438 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 SNHG28P0DPA3 235 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 BCRP11274 1271 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 ATP4AP20648 1035 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 RPA1P27694 616 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 ALDH3A1P30838 453 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 PCK1P35558 622 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 CASP4P49662 377 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 WASHC2DQ5SRD0 308 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 SLC30A9Q6PML9 568 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 APBB1IPQ7Z5R6 666 aaPredicted RBP13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 VSIG1Q86XK7 387 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 OLIG1Q8TAK6 271 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 FBXO41Q8TF61 875 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 SLCO2A1Q92959 643 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 TSC22D3Q99576 134 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 PITPNM3Q9BZ71 974 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 YIPF3Q9GZM5 350 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 CDC42EP4Q9H3Q1 356 aaKnown RBP13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 LOC102724428A0A0B4J2F2 783 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 ENO4A6NNW6 628 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 TBX3O15119 743 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 MAPK13O15264 365 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 LINGO3P0C6S8 592 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 ATP6V1C1P21283 382 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 SIK1P57059 783 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 MIGA2Q7L4E1 593 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 SLC13A5Q86YT5 568 aaPredicted RBP13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 MFN1Q8IWA4 741 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 MAIP1Q8WWC4 291 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 APEX2Q9UBZ4 518 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 COG5Q9UP83 839 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 FRMPD4Q14CM0 1322 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 COL4A1P02462 1669 aa13.29□□□□□ -0.28
CHMP2B-201ENST00000263780 DCTN3O75935 186 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 TTC4O95801 387 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 CEP128Q6ZU80 1094 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 STXBP4Q6ZWJ1 553 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 MBOAT7Q96N66 472 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 INTS2Q9H0H0 1204 aaKnown RBP13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 LRRC19Q9H756 370 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 OLFML3Q9NRN5 406 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 ETAA1Q9NY74 926 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 LGALS13Q9UHV8 139 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 JAG2Q9Y219 1238 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 FRMD4BQ9Y2L6 1034 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 STARD13Q9Y3M8 1113 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
CHMP2B-201ENST00000263780 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms