RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SLC20A1Q8WUM9 679 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 FAM161BQ96MY7 647 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 RXFP1Q9HBX9 757 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 PIK3C2AO00443 1686 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 FGFR2P21802 821 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 DAB2IPQ5VWQ8 1189 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 CCDC62Q6P9F0 684 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 CEP120Q8N960 986 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 MAGEC3Q8TD91 643 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 RNPEPL1Q9HAU8 725 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 STOML1Q9UBI4 398 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 MYH7BA7E2Y1 1941 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 PFASO15067 1338 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 AKAP12Q02952 1782 aa17.05■□□□□ 0.32
PRPF40B-201ENST00000261897 KIAA0391O15091 583 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 GAS8O95995 478 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 PTENP60484 403 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 MRPS35P82673 323 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 TAF1BQ53T94 588 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 PROM2Q8N271 834 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 SLC25A41Q8N5S1 370 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 TBC1D10AQ9BXI6 508 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 SAYSD1Q9NPB0 183 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 KCNQ5Q9NR82 932 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 KITP10721 976 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 CALB2P22676 271 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 TMED1Q13445 227 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 OLFML2BQ68BL8 750 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 PIGWQ7Z7B1 504 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 CEP95Q96GE4 821 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 EDEM3Q9BZQ6 932 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 C12orf65Q9H3J6 166 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 MAP3K7O43318 606 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 CACNA2D1P54289 1103 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 FAM182AQ5T1J6 154 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 IRF2BP2Q7Z5L9 587 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 MTDHQ86UE4 582 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 ECHDC2Q86YB7 292 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 MAML1Q92585 1016 aa17.04■□□□□ 0.32
PRPF40B-201ENST00000261897 SNX30Q5VWJ9 437 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 ANO7Q6IWH7 933 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 TLCD1Q96CP7 247 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 FAM84BQ96KN1 310 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 ATP8A2Q9NTI2 1148 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 PHTF1Q9UMS5 762 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 G3V3G9 751 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 KRT36O76013 467 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 LCA5LO95447 670 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 CALCAP01258 141 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 CHKAP35790 457 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 SCNN1BP51168 640 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 PSMC6P62333 389 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 CETN1Q12798 172 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 GRM4Q14833 912 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 SMAD1Q15797 465 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 C6orf163Q5TEZ5 329 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 FAM13CQ8NE31 585 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 NSUN4Q96CB9 384 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 CCDC124Q96CT7 223 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 GOLGA8IPA6NC78 632 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 GOLGA8JA6NMD2 632 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 ZBED4O75132 1171 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 PHF2O75151 1096 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 TAL1P17542 331 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 PIK3CAP42336 1068 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 GCLMP48507 274 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 PEX5P50542 639 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 RAB27AP51159 221 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 COL23A1Q86Y22 540 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 ANKRD35Q8N283 1001 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 PGM2Q96G03 612 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 RILPQ96NA2 401 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 SMYD3Q9H7B4 428 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 RGL1Q9NZL6 768 aa17.03■□□□□ 0.32
PRPF40B-201ENST00000261897 PYGMP11217 842 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 ESRRAP11474 423 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 PLS3P13797 630 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 ITGA8P53708 1063 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 IRX4P78413 519 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 MTMR2Q13614 643 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 CROCCP2Q86T23 111 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 CEP63Q96MT8 703 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 AIPL1Q9NZN9 384 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 TROVE2P10155 538 aaKnown RBP eCLIP17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 CHRNA3P32297 505 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 KDSRQ06136 332 aa17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 TRIM28Q13263 835 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-201ENST00000261897 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms