RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 KIFC2Q96AC6 838 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 NSL1Q96IY1 281 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 CDHR1Q96JP9 859 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 MYD88Q99836 296 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 GRIP2Q9C0E4 1043 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 UPF3AQ9H1J1 476 aaKnown RBP11.33□□□□□ -0.6
KPNA3-201ENST00000261667 RWDD2AQ9UIY3 292 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 MAD1L1Q9Y6D9 718 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 A6NJR5 290 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
KPNA3-201ENST00000261667 E7EWF7 191 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 H3BRJ5 948 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 RAD51CO43502 376 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 PLS3P13797 630 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 GYS1P13807 737 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 RPL13P26373 211 aaKnown RBP11.33□□□□□ -0.6
KPNA3-201ENST00000261667 ADD1P35611 737 aaKnown RBP11.33□□□□□ -0.6
KPNA3-201ENST00000261667 RGS21Q2M5E4 152 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 ISLR2Q6UXK2 745 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 BTN2A1Q7KYR7 527 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 EME1Q96AY2 570 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 APPL1Q9UKG1 709 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 COMMD10Q9Y6G5 202 aa11.33□□□□□ -0.6
KPNA3-201ENST00000261667 FAM208AQ9UK61 1670 aaKnown RBP11.32□□□□□ -0.6
KPNA3-201ENST00000261667 PODXLO00592 558 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 RNF113AO15541 343 aaKnown RBP11.32□□□□□ -0.6
KPNA3-201ENST00000261667 TOM1L1O75674 476 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 PRLP01236 227 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 A1BGP04217 495 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 EIF2S1P05198 315 aaKnown RBP11.32□□□□□ -0.6
KPNA3-201ENST00000261667 LDHCP07864 332 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 HSPA6P17066 643 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 EPHB2P29323 1055 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 IQCF2Q8IXL9 164 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 SYMPKQ92797 1274 aaKnown RBP11.32□□□□□ -0.6
KPNA3-201ENST00000261667 TMEM237Q96Q45 408 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 ARHGEF10LQ9HCE6 1279 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 USTQ9Y2C2 406 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 PXDNQ92626 1479 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 MGRN1O60291 552 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 KITP10721 976 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 EPB41P11171 864 aaKnown RBP11.32□□□□□ -0.6
KPNA3-201ENST00000261667 CIITAP33076 1130 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 WASHC5Q12768 1159 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 GATAD2AQ86YP4 633 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 DQX1Q8TE96 717 aaKnown RBP11.32□□□□□ -0.6
KPNA3-201ENST00000261667 DEPDC7Q96QD5 511 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 BEGAINQ9BUH8 593 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 DNM1LO00429 736 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 TOM1O60784 492 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 GUCY1B2O75343 617 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 HOXC9P31274 260 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 IL1RL1Q01638 556 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 DDB1Q16531 1140 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 TRIM60Q495X7 471 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 PRR23CQ6ZRP0 262 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 CCNJLQ8IV13 435 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 TRPC7Q9HCX4 862 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 KCND1Q9NSA2 647 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 FAM53CQ9NYF3 392 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 FAM153AQ9UHL3 310 aa11.32□□□□□ -0.6
KPNA3-201ENST00000261667 SIPA1L3O60292 1781 aaPredicted RBP11.32□□□□□ -0.6
KPNA3-201ENST00000261667 ABCC6O95255 1503 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 M0R3G1 203 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 KLHL41O60662 606 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 DEFA1P59665 94 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 DEFA3P59666 94 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 RBM44Q6ZP01 1051 aaKnown RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 NELFCDQ8IXH7 590 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 MYOCDQ8IZQ8 938 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 TAB3Q8N5C8 712 aaPredicted RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 PRPF18Q99633 342 aaKnown RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 VAT1LQ9HCJ6 419 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 TFR2Q9UP52 801 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 APOBEC2Q9Y235 224 aaKnown RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 B4E1Z4 1266 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 PTCD1O75127 700 aaKnown RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 DDX5P17844 614 aaKnown RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 GRK2P25098 689 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 NR1H3Q13133 447 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 DNAJC3Q13217 504 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 SGO2Q562F6 1265 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 ATG16L1Q676U5 607 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 SIX6OS1Q8N1H7 587 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 TSEN2Q8NCE0 465 aaKnown RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 VPS50Q96JG6 964 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 SLITRK6Q9H5Y7 841 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 PCDH18Q9HCL0 1135 aa11.31□□□□□ -0.6
KPNA3-201ENST00000261667 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
KPNA3-201ENST00000261667 ARPC4-TTLL3A0A0A6YYG9 625 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms