RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 RCSD1Q6JBY9 416 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 ADGRA1Q86SQ6 560 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 SLC17A8Q8NDX2 589 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 WNT8AQ9H1J5 351 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 NPHS2Q9NP85 383 aa17.32■□□□□ 0.36
SREBF1-201ENST00000261646 H7C0C1 242 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 AGPSO00116 658 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 ATP5OP48047 213 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-201ENST00000261646 NXNQ6DKJ4 435 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 TEX9Q8N6V9 391 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 SEMA4AQ9H3S1 761 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 SLC4A7Q9Y6M7 1214 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 GOLGA8RI6L899 631 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 HNRNPDLO14979 420 aaKnown RBP17.31■□□□□ 0.36
SREBF1-201ENST00000261646 TOM1L1O75674 476 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 GHRP10912 638 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 ARL1P40616 181 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-201ENST00000261646 CERKLQ49MI3 558 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-201ENST00000261646 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-201ENST00000261646 SH3GL2Q99962 352 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 TEKT3Q9BXF9 490 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 PCDHB4Q9Y5E5 795 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 MAPK7Q13164 816 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 SEC23AQ15436 765 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 SCYL2Q6P3W7 929 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 NSUN4Q96CB9 384 aaKnown RBP17.31■□□□□ 0.36
SREBF1-201ENST00000261646 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 UBN1Q9NPG3 1134 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 NDE1Q9NXR1 346 aa17.31■□□□□ 0.36
SREBF1-201ENST00000261646 GNAT1P11488 350 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 LRRC36Q1X8D7 754 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 TRIM42Q8IWZ5 723 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 CARD9Q9H257 536 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 HAO1Q9UJM8 370 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 FAM47DPA6NHR8 397 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 POLR2MP0CAP2 368 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 PGM1P36871 562 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 TRADDQ15628 312 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 ZBED8Q8IZ13 594 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 IQCKQ8N0W5 287 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 ACTRT1Q8TDG2 376 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 TRIM11Q96F44 468 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 MRPL47Q9HD33 250 aaKnown RBP17.3■□□□□ 0.36
SREBF1-201ENST00000261646 G3BP2Q9UN86 482 aaKnown RBP17.3■□□□□ 0.36
SREBF1-201ENST00000261646 KRT19P08727 400 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 KITP10721 976 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-201ENST00000261646 ITPK1Q13572 414 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 STAT4Q14765 748 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 AGPAT1Q99943 283 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 PAPOLBQ9NRJ5 636 aaKnown RBP17.3■□□□□ 0.36
SREBF1-201ENST00000261646 COMMD10Q9Y6G5 202 aa17.3■□□□□ 0.36
SREBF1-201ENST00000261646 LIG4P49917 911 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 PDE1BQ01064 536 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 PPP2R5CQ13362 524 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 ORC2Q13416 577 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 TMC3Q7Z5M5 1100 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 C18orf8Q96DM3 657 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 ROPN1BQ9BZX4 212 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 ROPN1Q9HAT0 212 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 PDXKO00764 312 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 MARK3P27448 753 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 KCNMA1Q12791 1236 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 TATDN2Q93075 761 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 ZNF577Q9BSK1 485 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 STAM2O75886 525 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 GDF11O95390 407 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 KNDC1Q76NI1 1749 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 NME8Q8N427 588 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 PRCCQ92733 491 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 OSGEPQ9NPF4 335 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 USP21Q9UK80 565 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 PFASO15067 1338 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 FANCGO15287 622 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 SHOX2O60902 331 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 RNF8O76064 485 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 GGPS1O95749 300 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 UBTFL6P0CB48 400 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 NCF2P19878 526 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 COMTP21964 271 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 NMT1P30419 496 aaKnown RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 GPS1Q13098 491 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 GEN1Q17RS7 908 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 KIAA0895Q8NCT3 520 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 CCDC124Q96CT7 223 aaKnown RBP17.29■□□□□ 0.36
SREBF1-201ENST00000261646 STK33Q9BYT3 514 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 TMEM206Q9H813 350 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 DBNDD1Q9H9R9 158 aa17.29■□□□□ 0.36
SREBF1-201ENST00000261646 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 USP17L10C9JJH3 530 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 EPHB6O15197 1021 aa17.28■□□□□ 0.36
SREBF1-201ENST00000261646 ALDH5A1P51649 535 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-201ENST00000261646 PDIA2Q13087 525 aaKnown RBP17.28■□□□□ 0.36
SREBF1-201ENST00000261646 C12orf60Q5U649 245 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms