RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 A0A1W2PQJ5 194 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 TCRBV7S2A1N4TA0A589 114 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 NSFP46459 744 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 CFAP157Q5JU67 520 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 SLFN12Q8IYM2 578 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 AGR3Q8TD06 166 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 CCDC124Q96CT7 223 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 TOPORSQ9NS56 1045 aaPredicted RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 LARSQ9P2J5 1176 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 RGPD8O14715 1765 aaPredicted RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 GH1P01241 217 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 PSMC4P43686 418 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 PPATQ06203 517 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 ZRSR2Q15696 482 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 FYB2Q5VWT5 728 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 EPM2AIP1Q7L775 607 aaPredicted RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 EEPD1Q7L9B9 569 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 PROM2Q8N271 834 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 SMYD3Q9H7B4 428 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 XRN1Q8IZH2 1706 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 OPHN1O60890 802 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 SGPL1O95470 568 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 KRT10P13645 584 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 RPL21P46778 160 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 NPEPPSP55786 919 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 HGSNATQ68CP4 663 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 CCDC89Q8N998 374 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 CAVIN3Q969G5 261 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 CEP63Q96MT8 703 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 SMC6Q96SB8 1091 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 SH3GL2Q99962 352 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 CNOT10Q9H9A5 744 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 GEMIN8Q9NWZ8 242 aaKnown RBP10.83□□□□□ -0.68
PALB2-201ENST00000261584 PCSK1NQ9UHG2 260 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 MAD1L1Q9Y6D9 718 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 MYH8P13535 1937 aa10.83□□□□□ -0.68
PALB2-201ENST00000261584 SYNJ2BP-COX16A0A087WUM0 186 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 FMO5P49326 533 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 RWDD2BP57060 319 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 NOP14P78316 857 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 IL9RQ01113 521 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 BFSP1Q12934 665 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 SPATA21Q7Z572 469 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 ZBED8Q8IZ13 594 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 KIFAP3Q92845 792 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 INPP4AQ96PE3 977 aaPredicted RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 MKNK1Q9BUB5 465 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 TMEM117Q9H0C3 514 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 C12orf65Q9H3J6 166 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 GDF3Q9NR23 364 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 COX16Q9P0S2 106 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 DAGLAQ9Y4D2 1042 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 GPC5P78333 572 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 ADCY2Q08462 1091 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 ZNF543Q08ER8 600 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 BYSLQ13895 437 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 TSNAXIP1Q2TAA8 658 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 CBWD6Q4V339 395 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 CBWD3Q5JTY5 395 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 CBWD5Q5RIA9 395 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 UBAP2Q5T6F2 1119 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 ZFPM1Q8IX07 1006 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 RBM46Q8TBY0 533 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 AGAP11Q8TF27 550 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 CBWD1Q9BRT8 395 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 TTYH3Q9C0H2 523 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 AJAP1Q9UKB5 411 aaPredicted RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 LRRIQ4A6NIV6 560 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 NOL4O94818 638 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 RASSF2P50749 326 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 PLA2G4FQ68DD2 849 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 RINT1Q6NUQ1 792 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 ALG3Q92685 438 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 RBM17Q96I25 401 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 PPP1R36Q96LQ0 422 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 AGPAT1Q99943 283 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 SPZ1Q9BXG8 430 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 CALN1Q9BXU9 219 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 SPATS2LQ9NUQ6 558 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
PALB2-201ENST00000261584 PCDHB4Q9Y5E5 795 aa10.82□□□□□ -0.68
PALB2-201ENST00000261584 TRAPPC3O43617 180 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 ATP6V1G2O95670 118 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 SERPINB2P05120 415 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 PYGMP11217 842 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 BMP3P12645 472 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 ATP5DP30049 168 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 ALDH5A1P51649 535 aaPredicted RBP10.81□□□□□ -0.68
PALB2-201ENST00000261584 AP1ARQ63HQ0 302 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 CNPY4Q8N129 248 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 SLC5A5Q92911 643 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 FAM213AQ9BRX8 229 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 MTFR1LQ9H019 292 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 UBN1Q9NPG3 1134 aa10.81□□□□□ -0.68
PALB2-201ENST00000261584 USP15Q9Y4E8 981 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms