RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 EPC1Q9H2F5 836 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 TBC1D22BQ9NU19 505 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 ZFP69BQ9UJL9 534 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 USP27XA6NNY8 438 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 SP110Q9HB58 689 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 SUN2Q9UH99 717 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 E9PCH4 1651 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 E5RI56 91 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 TEX33O43247 280 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 MAGOHP61326 146 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 DHX40Q8IX18 779 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 AGR3Q8TD06 166 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 SLC13A1Q9BZW2 595 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 SIK2Q9H0K1 926 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 DCTN4Q9UJW0 460 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 CAMSAP1Q5T5Y3 1602 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 DPYSL4O14531 572 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 ROR1Q01973 937 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 LRRC14Q15048 493 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 LRRC31Q6UY01 552 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 TAS2R42Q7RTR8 314 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 KCNV2Q8TDN2 545 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 PPP1R36Q96LQ0 422 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 TRIM55Q9BYV6 548 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 SDC4P31431 198 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 PDIA2Q13087 525 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 ZBED8Q8IZ13 594 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 RPAP3Q9H6T3 665 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 APOBEC2Q9Y235 224 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 ITM2BQ9Y287 266 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 SLC4A7Q9Y6M7 1214 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 E2F6O75461 281 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 FBXW4P57775 412 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 KRT76Q01546 638 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 CLEC4GQ6UXB4 293 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 RNF168Q8IYW5 571 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 DDX47Q9H0S4 455 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 BARHL2Q9NY43 387 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 QRICH2Q9H0J4 1663 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 UBA6A0AVT1 1052 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 EIF4E1BA6NMX2 242 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 P4HBP07237 508 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 SLC10A5Q5PT55 438 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 RFX8Q6ZV50 586 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 RAPGEF5Q92565 580 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 HPS3Q969F9 1004 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 ACTR5Q9H9F9 607 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 SUFUQ9UMX1 484 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 A8MXQ7 604 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 GYG2O15488 501 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 GUCY1A2P33402 732 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 OSBPL9Q96SU4 736 aa12.87□□□□□ -0.35
COL8A1-201ENST00000261037 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.87□□□□□ -0.35
COL8A1-201ENST00000261037 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 KRT14P02533 472 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 KIAA1586Q9HCI6 787 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 EMSYQ7Z589 1322 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 CCDC188H7C350 402 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 DCTN3O75935 186 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 AKR1B1P15121 316 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 HEATR6Q6AI08 1181 aaKnown RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 PROM2Q8N271 834 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 EGFL8Q99944 293 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 FBXO40Q9UH90 709 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 IP6K2Q9UHH9 426 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 ABCA6Q8N139 1617 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 TULP4Q9NRJ4 1543 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 A0A087WUV0 522 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 F5H6K3 240 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 DIAPH2O60879 1101 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 SETSIPP0DME0 302 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 SH3BGRP55822 239 aaPredicted RBP12.86□□□□□ -0.35
COL8A1-201ENST00000261037 KLRC3Q07444 240 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 CCDC144BQ3MJ40 725 aa12.86□□□□□ -0.35
COL8A1-201ENST00000261037 ZC3H18Q86VM9 953 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms