RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 DYNLT1P63172 113 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 DEUP1Q05D60 604 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 EPC2Q52LR7 807 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 LRRC55Q6ZSA7 311 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 FITM2Q8N6M3 262 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 NSUN4Q96CB9 384 aaKnown RBP13.2□□□□□ -0.3
USP30-201ENST00000257548 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 CAPN9O14815 690 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 ASAP2O43150 1006 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 PLS3P13797 630 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 TMED1Q13445 227 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 CUL3Q13618 768 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 GRM4Q14833 912 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 BICD1Q96G01 975 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 ACP6Q9NPH0 428 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
USP30-201ENST00000257548 RABGAP1Q9Y3P9 1069 aa13.2□□□□□ -0.3
USP30-201ENST00000257548 LMO7Q8WWI1 1683 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 DDX3XO00571 662 aaKnown RBP eCLIP13.19□□□□□ -0.33e-6■■■■■ 39.8
USP30-201ENST00000257548 AKAP3O75969 853 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 GSTA1P08263 222 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
USP30-201ENST00000257548 TNFRSF8P28908 595 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 MAPK4P31152 587 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 BTDP43251 543 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 CDK8P49336 464 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 KCNA1Q09470 495 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 SPARCL1Q14515 664 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 SMAD1Q15797 465 aaKnown RBP13.19□□□□□ -0.3
USP30-201ENST00000257548 NT5DC3Q86UY8 548 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 C4orf32Q8N8J7 132 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 B4GALNT2Q8NHY0 566 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 TTC8Q8TAM2 541 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 SCFD2Q8WU76 684 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 RMDN2Q96LZ7 410 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
USP30-201ENST00000257548 MAD2L2Q9UI95 211 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 KDM3AQ9Y4C1 1321 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 HSPA1LP34931 641 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 SERPINB6P35237 376 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 DPH6Q7L8W6 267 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 RAB3IL1Q8TBN0 382 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 SCFD1Q8WVM8 642 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 ARHGEF26Q96DR7 871 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 MXD3Q9BW11 206 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 ANAPC7Q9UJX3 599 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 TUBGCP6Q96RT7 1819 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
USP30-201ENST00000257548 FAM187AA6NFU0 413 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 HNRNPH3P31942 346 aaKnown RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 KDSRQ06136 332 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 CNGA2Q16280 664 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 PTF1AQ7RTS3 328 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 MIPOL1Q8TD10 442 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 FAM196BA6NMK8 535 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 HARSP12081 509 aaKnown RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 SOX5P35711 763 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 MRPS35P82673 323 aaKnown RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 MIS18BP1Q6P0N0 1132 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 EXOC3L1Q86VI1 746 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 ZNF512BQ96KM6 892 aaPredicted RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 IL17RBQ9NRM6 502 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 MARCOQ9UEW3 520 aaPredicted RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 GGA2Q9UJY4 613 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 NOL4O94818 638 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 ETS2P15036 469 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 CASP5P51878 434 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 GSTO1P78417 241 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 ANKMY2Q8IV38 441 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
USP30-201ENST00000257548 ZMYND8Q9ULU4 1186 aaPredicted RBP13.18□□□□□ -0.3
USP30-201ENST00000257548 RIPK2O43353 540 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PHF2O75151 1096 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 EPHB1P54762 984 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 AUHQ13825 339 aaKnown RBP13.17□□□□□ -0.3
USP30-201ENST00000257548 PSMD6Q15008 389 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PRUNE1Q86TP1 453 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 PIP4K2CQ8TBX8 421 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 KIFAP3Q92845 792 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 REEP2Q9BRK0 252 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
USP30-201ENST00000257548 NUP85Q9BW27 656 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
USP30-201ENST00000257548 USP17L10C9JJH3 530 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms