RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 CSRNP1Q96S65 589 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 GOLGA8KD6RF30 607 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 DDX3XO00571 662 aaKnown RBP eCLIP12.2□□□□□ -0.46
PDE6B-201ENST00000255622 EYA4O95677 639 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 ERVK-9P63128 1117 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 PDCLQ13371 301 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 CUL3Q13618 768 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 STRIP1Q5VSL9 837 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 U2AF1L4Q8WU68 220 aaKnown RBP12.2□□□□□ -0.46
PDE6B-201ENST00000255622 PRMT6Q96LA8 375 aaPredicted RBP12.2□□□□□ -0.46
PDE6B-201ENST00000255622 RNF14Q9UBS8 474 aa12.2□□□□□ -0.46
PDE6B-201ENST00000255622 TPX2Q9ULW0 747 aaKnown RBP12.2□□□□□ -0.46
PDE6B-201ENST00000255622 AHCYL1O43865 530 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 TRIM49P0CI25 452 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 TRIM49CP0CI26 452 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 ITGA4P13612 1032 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 CIITAP33076 1130 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 CYP2J2P51589 502 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 PAK2Q13177 524 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 PLS1Q14651 629 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 ZNF394Q53GI3 561 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 OTOP1Q7RTM1 612 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 TPCN2Q8NHX9 752 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 DDX47Q9H0S4 455 aaKnown RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 OSGEPQ9NPF4 335 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 TRPC5Q9UL62 973 aaPredicted RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 KIF13BQ9NQT8 1826 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 FAM13AO94988 1023 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 MYO1EQ12965 1108 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 NNTQ13423 1086 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 BMT2Q1RMZ1 405 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 ACCSLQ4AC99 568 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 CBWD6Q4V339 395 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 CBWD3Q5JTY5 395 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 CBWD5Q5RIA9 395 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 CFAP58Q5T655 872 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 ALS2CLQ60I27 953 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 METTL13Q8N6R0 699 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 LNX1Q8TBB1 728 aaPredicted RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 CLIP3Q96DZ5 547 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 HSD17B14Q9BPX1 270 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 GORASP1Q9BQQ3 440 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 TMEM59LQ9UK28 342 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 BZW2Q9Y6E2 419 aaKnown RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 FOSP01100 380 aaPredicted RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 HLTFQ14527 1009 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 FAM186BQ8IYM0 893 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 IQCKQ8N0W5 287 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 OLIG1Q8TAK6 271 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
PDE6B-201ENST00000255622 POLR3CQ9BUI4 534 aaPredicted RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 QTRT2Q9H974 415 aaKnown RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 NOC2LQ9Y3T9 749 aaKnown RBP12.19□□□□□ -0.46
PDE6B-201ENST00000255622 IGSF9BQ9UPX0 1349 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 TCP10L2B9ZVM9 353 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 NDUFB5O43674 189 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 EVI5O60447 810 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 FLOT1O75955 427 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 ZBTB48P10074 688 aaPredicted RBP12.18□□□□□ -0.46
PDE6B-201ENST00000255622 ECHS1P30084 290 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 CHRNA5P30532 468 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 MIS18BP1Q6P0N0 1132 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 C1orf186Q6ZWK4 172 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 MAEAQ7L5Y9 396 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 DAAM2Q86T65 1068 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 TTC30BQ8N4P2 665 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 ATP11CQ8NB49 1132 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 OR2W6PQ8NHA6 318 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 NEUROG2Q9H2A3 272 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 RHBDL2Q9NX52 303 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 PKD2L1Q9P0L9 805 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 CLRN2A0PK11 232 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 F8VZ95 297 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 DDX39AO00148 427 aaKnown RBP12.18□□□□□ -0.46
PDE6B-201ENST00000255622 EIF3HO15372 352 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDE6B-201ENST00000255622 SLC26A4O43511 780 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 FESP07332 822 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 ABCB4P21439 1286 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 RPL13P26373 211 aaKnown RBP12.18□□□□□ -0.46
PDE6B-201ENST00000255622 FLT3P36888 993 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 PRKCIP41743 596 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 ROR2Q01974 943 aaKnown RBP12.18□□□□□ -0.46
PDE6B-201ENST00000255622 KRT27Q7Z3Y8 459 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 NENFQ9UMX5 172 aa12.18□□□□□ -0.46
PDE6B-201ENST00000255622 BTNL10A8MVZ5 291 aa12.17□□□□□ -0.46
PDE6B-201ENST00000255622 SLC16A3O15427 465 aaKnown RBP12.17□□□□□ -0.46
PDE6B-201ENST00000255622 CREB3O43889 395 aa12.17□□□□□ -0.46
PDE6B-201ENST00000255622 LRRN2O75325 713 aa12.17□□□□□ -0.46
PDE6B-201ENST00000255622 STAT2P52630 851 aa12.17□□□□□ -0.46
PDE6B-201ENST00000255622 TNNC1P63316 161 aa12.17□□□□□ -0.46
PDE6B-201ENST00000255622 DMPKQ09013 629 aa12.17□□□□□ -0.46
PDE6B-201ENST00000255622 CCDC92Q53HC0 331 aaPredicted RBP12.17□□□□□ -0.46
PDE6B-201ENST00000255622 PEX26Q7Z412 305 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms