RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RFX8Q6ZV50 586 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 HPCAL4Q9UM19 191 aa19.9■□□□□ 0.78
SMARCC1-201ENST00000254480 MYBP10242 640 aa19.89■□□□□ 0.78
SMARCC1-201ENST00000254480 CAPRIN1Q14444 709 aaKnown RBP19.89■□□□□ 0.78
SMARCC1-201ENST00000254480 TAF11Q15544 211 aa19.89■□□□□ 0.78
SMARCC1-201ENST00000254480 ATG16L1Q676U5 607 aa19.89■□□□□ 0.78
SMARCC1-201ENST00000254480 BZW1Q7L1Q6 419 aaKnown RBP19.89■□□□□ 0.78
SMARCC1-201ENST00000254480 SNX19Q92543 992 aa19.89■□□□□ 0.78
SMARCC1-201ENST00000254480 UBA6A0AVT1 1052 aaPredicted RBP19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 KRT37O76014 449 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 OSBPL9Q96SU4 736 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 SYNGAP1Q96PV0 1343 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 TTI1O43156 1089 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 PAMP19021 973 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 KRT80Q6KB66 452 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 LRRC31Q6UY01 552 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 EPM2AIP1Q7L775 607 aaPredicted RBP19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 ATG9AQ7Z3C6 839 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 MICALL2Q8IY33 904 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 ZBED8Q8IZ13 594 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 DHX38Q92620 1227 aaKnown RBP19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 CDHR2Q9BYE9 1310 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 POLRMTO00411 1230 aaKnown RBP19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 YWHABP31946 246 aaKnown RBP19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 TXLNGQ9NUQ3 528 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 SLC9A2Q9UBY0 812 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 HAUS6Q7Z4H7 955 aa19.89■□□□□ 0.77
SMARCC1-201ENST00000254480 PDIA2Q13087 525 aaKnown RBP19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 DPYSL4O14531 572 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 CALB1P05937 261 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 KIAA1755Q5JYT7 1200 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 PROM2Q8N271 834 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 URGCPQ8TCY9 931 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 TXNP10599 105 aaKnown RBP19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 RGS7P49802 495 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 APOBEC3FQ8IUX4 373 aaKnown RBP19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 TRIM4Q9C037 500 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 PIDD1Q9HB75 910 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 PIN4Q9Y237 131 aaKnown RBP19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 PODXLO00592 558 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 ATP9BO43861 1147 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 KRT39Q6A163 491 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 DPF2Q92785 391 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 GPD1LQ8N335 351 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 MORC4Q8TE76 937 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 NSUN4Q96CB9 384 aaKnown RBP19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 CPSF1Q10570 1443 aaKnown RBP19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 ABCA8O94911 1581 aa19.88■□□□□ 0.77
SMARCC1-201ENST00000254480 TAC1P20366 129 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 SPARCL1Q14515 664 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 HEATR6Q6AI08 1181 aaKnown RBP19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 RASSF3Q86WH2 238 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 ANKMY2Q8IV38 441 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 ELMOD1Q8N336 334 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 SYT2Q8N9I0 419 aaPredicted RBP19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 KIAA1586Q9HCI6 787 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 SLC13A4Q9UKG4 626 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 PVALEFA0A1B0GWK0 134 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 ATP1A1P05023 1023 aaKnown RBP19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 TBC1D16Q8TBP0 767 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 SP110Q9HB58 689 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 FAM117BQ6P1L5 589 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 OR6P1Q8NGX9 317 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 GCOM2Q9BZD3 368 aaPredicted RBP19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 MAPK13O15264 365 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 PMS2P54278 862 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 GJD4Q96KN9 370 aaPredicted RBP19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 EFHD1Q9BUP0 239 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 ZNF185O15231 689 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 MAP3K7O43318 606 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 UPP2O95045 317 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 HMBSP08397 361 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 STMN1P16949 149 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 SFNP31947 248 aa19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 EIF3BP55884 814 aaKnown RBP19.87■□□□□ 0.77
SMARCC1-201ENST00000254480 H3BRJ5 948 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 CDH6P55285 790 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 SKIV2LQ15477 1246 aaKnown RBP19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 E2F4Q16254 413 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 TAS2R42Q7RTR8 314 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 TRIM59Q8IWR1 403 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 CPA5Q8WXQ8 436 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 MS4A14Q96JA4 679 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 HMGB1P1B2RPK0 211 aaPredicted RBP19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 E5RI56 91 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 PAPOLAP51003 745 aaKnown RBP19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 MTM1Q13496 603 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 TFDP2Q14188 446 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 C12orf60Q5U649 245 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 CCDC188H7C350 402 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 ATP8B1O43520 1251 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 DIAPH2O60879 1101 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 GUCY2CP25092 1073 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 BAATQ14032 418 aaPredicted RBP19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 OR6J1Q8NGC5 347 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 ZNF507Q8TCN5 953 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 TADA3O75528 432 aa19.86■□□□□ 0.77
SMARCC1-201ENST00000254480 RAPGEF5Q92565 580 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms